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The map label for this gene is pecM [H]

Identifier: 160877347

GI number: 160877347

Start: 5023713

End: 5024570

Strand: Reverse

Name: pecM [H]

Synonym: Sbal195_4245

Alternate gene names: 160877347

Gene position: 5024570-5023713 (Counterclockwise)

Preceding gene: 160877348

Following gene: 160877346

Centisome position: 93.96

GC content: 50.0

Gene sequence:

>858_bases
ATGCCTTTTGTAATCGCCTTACTCGCCCCTGTATTTTGGGGGACGACCTATGCGTTAGTGAGTCTCTACTTACATGATAT
GTCGCCCTACTGGGTGGCCGTGTGGCGCGCGCTGCCTGCGGGAATACTGATGTTGATGCTGCGTCCACGTTTGCCAACGC
TGGCTTGGTCTAAATTAAGCTTGCTGGCGTTTTGTAATATTGGCGCCTTCTTTGCGCTGCTGTTTATCGGTGCGTATCGT
TTGCCGGGCGCTGTGGCGGGTACCTTAGGGGCGACGCTGCCGTTAATTTTCTTAATCTTAGCTTGGGTGATAGATAAAAA
ACGCCCTGGGATGAAGTGGTTGCTATTAGGTTTGATGGGATTAGGAGGGGTGATTTTACTGCTAAACCCGTCGGCGGATC
TCGACCCTATTGGGGTCTTGTGTATGTTGAGCGCCACGACCTTAATTGCTTTCTCTTCTCGCTGGATGCAAAAGTGGGAT
GTGGGTGACTTTTTAGTGCTCACAGCATGGCAACTGTTTTTGGGCGGCTTGATGTTAATCCCGCTGGCATGGTTTATGGC
GGGCCCGCCGCAGTTACCTAGCCTGACAGTGGTGCCGTCGTTACTATGGTTAGTGATTGCCAACACCGCCATCGCTTATT
GGGCTTGGCTGTGGTCGATGCGAAATTTAGGACCAGAAATCATGGGCATGGTCGCTTTAGTCAATCCCGTGGTTGCCGTA
TCATTAGGGGTTATGATTGTGGGTGAGACCTTAGACATGCGTCAGTGGGCGGGTATAGGTGTAATATTACTGTCGCTGTT
ATTGATGAAATTGCCACAGAATTTAAGGTTAAACCCATTTAAAAAAGTGCAGCCCTAG

Upstream 100 bases:

>100_bases
TAACTCCCGCCGATAACGAGATATTCATAAACTTCACTTGCTAGGAGTGAAGACTGAGAATAACATATCTTCATATCAAG
ATACTTTTTGAAGAGTTATT

Downstream 100 bases:

>100_bases
TCAGTATTTTGGGGTAAATGAGGGATAGATGCTAAAACGTTTGGATCTGAATTTACTACCCGTACTGGAAATCCTGCTTG
AGGAACAAAGTGTGACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPFVIALLAPVFWGTTYALVSLYLHDMSPYWVAVWRALPAGILMLMLRPRLPTLAWSKLSLLAFCNIGAFFALLFIGAYR
LPGAVAGTLGATLPLIFLILAWVIDKKRPGMKWLLLGLMGLGGVILLLNPSADLDPIGVLCMLSATTLIAFSSRWMQKWD
VGDFLVLTAWQLFLGGLMLIPLAWFMAGPPQLPSLTVVPSLLWLVIANTAIAYWAWLWSMRNLGPEIMGMVALVNPVVAV
SLGVMIVGETLDMRQWAGIGVILLSLLLMKLPQNLRLNPFKKVQP

Sequences:

>Translated_285_residues
MPFVIALLAPVFWGTTYALVSLYLHDMSPYWVAVWRALPAGILMLMLRPRLPTLAWSKLSLLAFCNIGAFFALLFIGAYR
LPGAVAGTLGATLPLIFLILAWVIDKKRPGMKWLLLGLMGLGGVILLLNPSADLDPIGVLCMLSATTLIAFSSRWMQKWD
VGDFLVLTAWQLFLGGLMLIPLAWFMAGPPQLPSLTVVPSLLWLVIANTAIAYWAWLWSMRNLGPEIMGMVALVNPVVAV
SLGVMIVGETLDMRQWAGIGVILLSLLLMKLPQNLRLNPFKKVQP
>Mature_284_residues
PFVIALLAPVFWGTTYALVSLYLHDMSPYWVAVWRALPAGILMLMLRPRLPTLAWSKLSLLAFCNIGAFFALLFIGAYRL
PGAVAGTLGATLPLIFLILAWVIDKKRPGMKWLLLGLMGLGGVILLLNPSADLDPIGVLCMLSATTLIAFSSRWMQKWDV
GDFLVLTAWQLFLGGLMLIPLAWFMAGPPQLPSLTVVPSLLWLVIANTAIAYWAWLWSMRNLGPEIMGMVALVNPVVAVS
LGVMIVGETLDMRQWAGIGVILLSLLLMKLPQNLRLNPFKKVQP

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=200, Percent_Identity=30, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31365; Mature: 31234

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PFVIALLAPVFWGTTYALVSLYLHDMSPYWVAVWRALPAGILMLMLRPRLPTLAWSKLS
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLAFCNIGAFFALLFIGAYRLPGAVAGTLGATLPLIFLILAWVIDKKRPGMKWLLLGLMG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LGGVILLLNPSADLDPIGVLCMLSATTLIAFSSRWMQKWDVGDFLVLTAWQLFLGGLMLI
HCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
PLAWFMAGPPQLPSLTVVPSLLWLVIANTAIAYWAWLWSMRNLGPEIMGMVALVNPVVAV
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SLGVMIVGETLDMRQWAGIGVILLSLLLMKLPQNLRLNPFKKVQP
HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]