Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160877287

Identifier: 160877287

GI number: 160877287

Start: 4950963

End: 4951472

Strand: Reverse

Name: 160877287

Synonym: Sbal195_4184

Alternate gene names: NA

Gene position: 4951472-4950963 (Counterclockwise)

Preceding gene: 160877288

Following gene: 160877286

Centisome position: 92.6

GC content: 47.84

Gene sequence:

>510_bases
ATGCAAAACCGTGCACATTCAGAGGCGCCAGAGCAAAGACCAGTCCAGCATGCTGAACTCACTGGGCAGCATGCATCCGC
TGCCCACAATAAGGTGGTTGATCAGGCCATTGAGCAATTGGCTGAAATAGCGGCACTGAGCAGCTCGGTGAAGCAAGCCT
ATATCAATCAGTTAAATTTGGCAGGAAAAATAGCAACGGCAGAATGGCAGTTAACGGGTCGCAGCTTGATTATTGCTGCG
GCTTTGGTTGTCTGTTTTGGGACGGGTATTACCCTATTCTGGGGCAGTATTTTATTGCTGCTGGGCTATATGCTGTTTCA
ATTGAGCGGCTCGTTATTGATTACCGCGAGCGCGTTAGTGGTATTGCAGTTTGTGTTATTGATCTGGTGTTGGCGTAGCC
TGAGCTATGTACTGTCGCAAGCGGGTTTTTCAAAGACTTGGCAGCAGTTACGGTTGTTGTTTTCTACTCAACACTCAGCC
AACAAACAACAGGAAGATCAACAATGCTAG

Upstream 100 bases:

>100_bases
CCGTGAGCTGGCAGCGCAAAATCCGCTGGCCACCGCCGGGATAGCGTTTGCAGCTGGTGTAGTGTTGACTGCCTTGTTAC
GCCGTCGTTAGGGTGGGTTT

Downstream 100 bases:

>100_bases
TACAAAAGTTACTTAAAAAGCAGCAATTAGAGCTCACTGTACTGACGGAGCAAGGTCGGCTGCAGCATGAGTTATTGCAG
GTGAGGAAACAACAACTAGC

Product: putative orphan protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNLAGKIATAEWQLTGRSLIIAA
ALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALVVLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSA
NKQQEDQQC

Sequences:

>Translated_169_residues
MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNLAGKIATAEWQLTGRSLIIAA
ALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALVVLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSA
NKQQEDQQC
>Mature_169_residues
MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNLAGKIATAEWQLTGRSLIIAA
ALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALVVLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSA
NKQQEDQQC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18608; Mature: 18608

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNL
CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGKIATAEWQLTGRSLIIAAALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALV
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSANKQQEDQQC
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNL
CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGKIATAEWQLTGRSLIIAAALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALV
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSANKQQEDQQC
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA