| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877270
Identifier: 160877270
GI number: 160877270
Start: 4931425
End: 4931775
Strand: Reverse
Name: 160877270
Synonym: Sbal195_4167
Alternate gene names: NA
Gene position: 4931775-4931425 (Counterclockwise)
Preceding gene: 160877271
Following gene: 160877269
Centisome position: 92.23
GC content: 50.71
Gene sequence:
>351_bases ATGGCGGATGAGCAATTTACCGACAGCGGATTTTGGAACAAGGTTAAACTCTTTAGCCGTCAGGCGGGCAGGGAAGTGAT CGAGCGTGCCCTGTGGCTTTATTATGCGGCGCAGCAGCCGAATACGCCTAAATGGGCCAAGTCTGTCATCTTCGGTGCCT TGGCGTATTTTATTTCTCCCTTAGATGCGATCCCCGATCTCACACCTTTAGTGGGTTTTACCGATGACTTAGGTGCCCTT GCCGCAGCTTTGACTATGGTGACCTTATATATCGATGACGAAGTGAAATCCCTCGCGGCGGATAAACTGGCGCTCTGGTT TGGCGATAAACCGACGGAACCTAAGGTTTAA
Upstream 100 bases:
>100_bases TTTAAGCAACAATTTGGCCTGACCCCTGCGGCTTATCGTCGTACACTGTGAGGAGGAATAGATTGATACTCAAACAATCT CAAGCTGCAGGAGCGATATA
Downstream 100 bases:
>100_bases GCCTAATGGGCGCGACAAGACCTAAGTGATGCTAAATTGCGTTAAAAATATGATTTTATTAGGAGTCGTTGATTTGGTTT TTACTTAGATTTTCTGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MADEQFTDSGFWNKVKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFISPLDAIPDLTPLVGFTDDLGAL AAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV
Sequences:
>Translated_116_residues MADEQFTDSGFWNKVKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFISPLDAIPDLTPLVGFTDDLGAL AAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV >Mature_115_residues ADEQFTDSGFWNKVKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFISPLDAIPDLTPLVGFTDDLGALA AALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12886; Mature: 12755
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADEQFTDSGFWNKVKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFISP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LDAIPDLTPLVGFTDDLGALAAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure ADEQFTDSGFWNKVKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFISP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LDAIPDLTPLVGFTDDLGALAAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA