| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160877269
Identifier: 160877269
GI number: 160877269
Start: 4929834
End: 4931231
Strand: Reverse
Name: 160877269
Synonym: Sbal195_4166
Alternate gene names: NA
Gene position: 4931231-4929834 (Counterclockwise)
Preceding gene: 160877270
Following gene: 160877268
Centisome position: 92.22
GC content: 48.21
Gene sequence:
>1398_bases ATGAAAAATATTATGGTAGTGATCCTATGGTTTTTAGGTGTCTCTGCCGCTACCCCCGCGTTTGCCGATGAGGCATCTCC GGAACAACTCGCCCGTCTTTACCTCGATTTCATGGCGCAGAATAGTCGCCAGAGCGAAGCTTTGTGGCCGGGTTTTCGCC TCGAAGATAAAGTGCACCTCTTTAGTTATGGCGGCAACGTCTGGCTGCGTCAGCCCGGTGGCGAAATCATTCAAGATAAT AGTGTCTTAGAGTCAGTCAACCTGCAGTCTGGTTTGTCTGTTAATTTCGGTTTTCCGCAATATCAAGGTCAGCCAGGGGT ATTAATCCAACTCGAAGCGCCGAACATCCAATTCACTTCCGACACTAAGCCTACGGATTTAGCCTTTTTAATCTGGGCCA GTAATGGTCTGCATGAAGCTTTTCACTTTTATGCGCAATCCGAATGGCGAGTTTTAGAAGATGGCAGGCGTTACGAGGGC GAAGTGTTTCCGCTCAGCCTCGATGCCCGTTATTACCGTTTACAGTTGTTTGATGCCTTAATGGCGGCGCTGGCACAACC CGAGCAGCAGTCATTACACTTGAGCCATGCGGCCTATTGGTTGCAGCAATGGCGTCAAATTGCGCCAAACGAGGATAGAG TCGGTTACATCAACGACCTCGTCGAAGGCAGCGCTAAGTATGTGGAATTGGCCGCTGGCGCACGTATCTTGAGCCAAAAT CAAACCTTACTCGGTTATCAGCAAATACTGACCCAATATGTGCACGACTATTACCAGCAGCGGAAAATGTTGGGTGGTTG GACGGCTGAGGCGGAAAACATCGGTGCACTGGCGGGCATATTGTTGGATAGCACTCAAGACCCTTATGTGTGGAAAGAGT CTGTCATGTCGGGCATGTTACCGCTAGATTTACTGTTAAATCGCGTGAAACCAGTGCCGCCGGTGGAAAGAAAAGACAAT AAACAGAAGAAGCCGTTACAGGAAATGCTGGCGTATTATCCCGCCACTCAAGCGAAATTGTCGCAGCTATTATTGAATGC GCAGGACGTTAGAGTACCGTTATTGGTGATGCCGAGCGTCAGTGATAGCAGTAGTTTTATTGATGTGGGTGATGTGCGTT CTGGTTTTTATGTTGTGCCGTACCAAGATGAAATGACACAAGCCTACCTAGGGATGAGCGCGCAATTTAGTAACTTGTCA GTGAGTGGCAGTCCATTACTCGATGTTCCTGTACAAAATTATTGTGAGGGCATTGAGGCTGCAACTCTGTTACCTTTGGC ATTCCCCTTTCAGCGTGAGGGTCAGTATCTGGTATTCAATGAAGCAGAAGCCCATGGAACTATTAGGGTTTCTGCGAGTG TTGTTGATGGAAGAACCCTCTACTGTGCGATGAATTAA
Upstream 100 bases:
>100_bases CTGGGGTAAAAATATTTTTTTGCAAACGTTTCACTATTGCTTGATTGCGCTATATGCTAGCGCTGTTTTGTAAACCCCTT GTGTTTGTTTAGGCAGATAA
Downstream 100 bases:
>100_bases TAATGAGAAAAAATCAGCTCGAATTTACCTACATGCGTGGCATTGCGATTATCTTTATCGTGCTTGGCCACAGTATTTAC AACTCTGGAGAAGGTTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKNIMVVILWFLGVSAATPAFADEASPEQLARLYLDFMAQNSRQSEALWPGFRLEDKVHLFSYGGNVWLRQPGGEIIQDN SVLESVNLQSGLSVNFGFPQYQGQPGVLIQLEAPNIQFTSDTKPTDLAFLIWASNGLHEAFHFYAQSEWRVLEDGRRYEG EVFPLSLDARYYRLQLFDALMAALAQPEQQSLHLSHAAYWLQQWRQIAPNEDRVGYINDLVEGSAKYVELAAGARILSQN QTLLGYQQILTQYVHDYYQQRKMLGGWTAEAENIGALAGILLDSTQDPYVWKESVMSGMLPLDLLLNRVKPVPPVERKDN KQKKPLQEMLAYYPATQAKLSQLLLNAQDVRVPLLVMPSVSDSSSFIDVGDVRSGFYVVPYQDEMTQAYLGMSAQFSNLS VSGSPLLDVPVQNYCEGIEAATLLPLAFPFQREGQYLVFNEAEAHGTIRVSASVVDGRTLYCAMN
Sequences:
>Translated_465_residues MKNIMVVILWFLGVSAATPAFADEASPEQLARLYLDFMAQNSRQSEALWPGFRLEDKVHLFSYGGNVWLRQPGGEIIQDN SVLESVNLQSGLSVNFGFPQYQGQPGVLIQLEAPNIQFTSDTKPTDLAFLIWASNGLHEAFHFYAQSEWRVLEDGRRYEG EVFPLSLDARYYRLQLFDALMAALAQPEQQSLHLSHAAYWLQQWRQIAPNEDRVGYINDLVEGSAKYVELAAGARILSQN QTLLGYQQILTQYVHDYYQQRKMLGGWTAEAENIGALAGILLDSTQDPYVWKESVMSGMLPLDLLLNRVKPVPPVERKDN KQKKPLQEMLAYYPATQAKLSQLLLNAQDVRVPLLVMPSVSDSSSFIDVGDVRSGFYVVPYQDEMTQAYLGMSAQFSNLS VSGSPLLDVPVQNYCEGIEAATLLPLAFPFQREGQYLVFNEAEAHGTIRVSASVVDGRTLYCAMN >Mature_465_residues MKNIMVVILWFLGVSAATPAFADEASPEQLARLYLDFMAQNSRQSEALWPGFRLEDKVHLFSYGGNVWLRQPGGEIIQDN SVLESVNLQSGLSVNFGFPQYQGQPGVLIQLEAPNIQFTSDTKPTDLAFLIWASNGLHEAFHFYAQSEWRVLEDGRRYEG EVFPLSLDARYYRLQLFDALMAALAQPEQQSLHLSHAAYWLQQWRQIAPNEDRVGYINDLVEGSAKYVELAAGARILSQN QTLLGYQQILTQYVHDYYQQRKMLGGWTAEAENIGALAGILLDSTQDPYVWKESVMSGMLPLDLLLNRVKPVPPVERKDN KQKKPLQEMLAYYPATQAKLSQLLLNAQDVRVPLLVMPSVSDSSSFIDVGDVRSGFYVVPYQDEMTQAYLGMSAQFSNLS VSGSPLLDVPVQNYCEGIEAATLLPLAFPFQREGQYLVFNEAEAHGTIRVSASVVDGRTLYCAMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52173; Mature: 52173
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIMVVILWFLGVSAATPAFADEASPEQLARLYLDFMAQNSRQSEALWPGFRLEDKVHL CCCHHEHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE FSYGGNVWLRQPGGEIIQDNSVLESVNLQSGLSVNFGFPQYQGQPGVLIQLEAPNIQFTS EEECCEEEEECCCCCEECCCHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEECCCEEECC DTKPTDLAFLIWASNGLHEAFHFYAQSEWRVLEDGRRYEGEVFPLSLDARYYRLQLFDAL CCCCCCEEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHH MAALAQPEQQSLHLSHAAYWLQQWRQIAPNEDRVGYINDLVEGSAKYVELAAGARILSQN HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEHHHCCHHHCCC QTLLGYQQILTQYVHDYYQQRKMLGGWTAEAENIGALAGILLDSTQDPYVWKESVMSGML CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCC PLDLLLNRVKPVPPVERKDNKQKKPLQEMLAYYPATQAKLSQLLLNAQDVRVPLLVMPSV CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCC SDSSSFIDVGDVRSGFYVVPYQDEMTQAYLGMSAQFSNLSVSGSPLLDVPVQNYCEGIEA CCCCCEEEECCCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCCCEEECCHHHHHCCCCH ATLLPLAFPFQREGQYLVFNEAEAHGTIRVSASVVDGRTLYCAMN HHHHHEECCCCCCCCEEEEECCCCCCEEEEEEEEECCEEEEEEEC >Mature Secondary Structure MKNIMVVILWFLGVSAATPAFADEASPEQLARLYLDFMAQNSRQSEALWPGFRLEDKVHL CCCHHEHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE FSYGGNVWLRQPGGEIIQDNSVLESVNLQSGLSVNFGFPQYQGQPGVLIQLEAPNIQFTS EEECCEEEEECCCCCEECCCHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEECCCEEECC DTKPTDLAFLIWASNGLHEAFHFYAQSEWRVLEDGRRYEGEVFPLSLDARYYRLQLFDAL CCCCCCEEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHH MAALAQPEQQSLHLSHAAYWLQQWRQIAPNEDRVGYINDLVEGSAKYVELAAGARILSQN HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEHHHCCHHHCCC QTLLGYQQILTQYVHDYYQQRKMLGGWTAEAENIGALAGILLDSTQDPYVWKESVMSGML CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCC PLDLLLNRVKPVPPVERKDNKQKKPLQEMLAYYPATQAKLSQLLLNAQDVRVPLLVMPSV CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCC SDSSSFIDVGDVRSGFYVVPYQDEMTQAYLGMSAQFSNLSVSGSPLLDVPVQNYCEGIEA CCCCCEEEECCCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCCCEEECCHHHHHCCCCH ATLLPLAFPFQREGQYLVFNEAEAHGTIRVSASVVDGRTLYCAMN HHHHHEECCCCCCCCEEEEECCCCCCEEEEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA