| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is argR
Identifier: 160876914
GI number: 160876914
Start: 4490636
End: 4491106
Strand: Direct
Name: argR
Synonym: Sbal195_3810
Alternate gene names: 160876914
Gene position: 4490636-4491106 (Clockwise)
Preceding gene: 160876912
Following gene: 160876916
Centisome position: 83.98
GC content: 46.28
Gene sequence:
>471_bases ATGCAAACGACCAAGAATCAGGATGACCTTGTTAGAATTTTTAAGTCGATTTTAAAAGAAGAGCGCTTTGGCTCTCAAAG TGAAATCGTCACCGCCTTGCAAGCTGAAGGCTTTGGTAATATTAACCAATCAAAAGTATCACGCATGCTCAGCAAGTTCG GCGCAGTGCGGACTCGCAACGCTAAGCAAGAGATGGTGTATTGCTTGCCGGCCGAATTAGGCGTACCCACCGCGGGTAGC CCGCTGAAGAATTTGGTACTCGACGTCGATCATAACCAAGCAATGATTGTCGTGCGAACTAGCCCAGGTGCCGCGCAGCT GATTGCCCGTTTATTGGATTCTATCGGTAAACCAGAAGGCATTTTGGGCACGATTGCCGGTGATGACACTATCTTTATTT GTCCATCGAGCATCCAAGATATCGCCGATACCTTAGAAACCATCAAATCTTTATTCAATTACGCAGAATAA
Upstream 100 bases:
>100_bases GATTAGTGAATTTTTATTCAACCAATCTGGTTATTTGTTGACAATTTTTCTAAAAATATTCAAAATGGGCCTGTTTTTTT GAATAACGAATAATAATATT
Downstream 100 bases:
>100_bases AAAAACAGGTCAGCTTGCTGACCTGTTCTATTTCATCTGTACGCATTTCTGTCCAATCTTGCGCTGATTATTTGGCCATT GTCCCGATTACGTTACACAT
Product: arginine repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MQTTKNQDDLVRIFKSILKEERFGSQSEIVTALQAEGFGNINQSKVSRMLSKFGAVRTRNAKQEMVYCLPAELGVPTAGS PLKNLVLDVDHNQAMIVVRTSPGAAQLIARLLDSIGKPEGILGTIAGDDTIFICPSSIQDIADTLETIKSLFNYAE
Sequences:
>Translated_156_residues MQTTKNQDDLVRIFKSILKEERFGSQSEIVTALQAEGFGNINQSKVSRMLSKFGAVRTRNAKQEMVYCLPAELGVPTAGS PLKNLVLDVDHNQAMIVVRTSPGAAQLIARLLDSIGKPEGILGTIAGDDTIFICPSSIQDIADTLETIKSLFNYAE >Mature_156_residues MQTTKNQDDLVRIFKSILKEERFGSQSEIVTALQAEGFGNINQSKVSRMLSKFGAVRTRNAKQEMVYCLPAELGVPTAGS PLKNLVLDVDHNQAMIVVRTSPGAAQLIARLLDSIGKPEGILGTIAGDDTIFICPSSIQDIADTLETIKSLFNYAE
Specific function: Regulates arginine biosynthesis genes
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family
Homologues:
Organism=Escherichia coli, GI1789633, Length=153, Percent_Identity=69.9346405228758, Blast_Score=227, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGR_SHEB2 (B8EB56)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002359530.1 - ProteinModelPortal: B8EB56 - GeneID: 7088744 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_3628 - HOGENOM: HBG697909 - OMA: MVYCLPN - ProtClustDB: PRK05066 - GO: GO:0005737 - HAMAP: MF_00173 - InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - Gene3D: G3DSA:3.30.1360.40 - Gene3D: G3DSA:1.10.10.10 - PRINTS: PR01467 - ProDom: PD007402 - TIGRFAMs: TIGR01529
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C; SSF55252 Arg_repress
EC number: NA
Molecular weight: Translated: 16956; Mature: 16956
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTTKNQDDLVRIFKSILKEERFGSQSEIVTALQAEGFGNINQSKVSRMLSKFGAVRTRN CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC AKQEMVYCLPAELGVPTAGSPLKNLVLDVDHNQAMIVVRTSPGAAQLIARLLDSIGKPEG CHHHHEEECCHHCCCCCCCCCHHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC ILGTIAGDDTIFICPSSIQDIADTLETIKSLFNYAE EEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQTTKNQDDLVRIFKSILKEERFGSQSEIVTALQAEGFGNINQSKVSRMLSKFGAVRTRN CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC AKQEMVYCLPAELGVPTAGSPLKNLVLDVDHNQAMIVVRTSPGAAQLIARLLDSIGKPEG CHHHHEEECCHHCCCCCCCCCHHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC ILGTIAGDDTIFICPSSIQDIADTLETIKSLFNYAE EEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA