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The map label for this gene is hlyB [H]

Identifier: 160876893

GI number: 160876893

Start: 4468088

End: 4469752

Strand: Direct

Name: hlyB [H]

Synonym: Sbal195_3789

Alternate gene names: 160876893

Gene position: 4468088-4469752 (Clockwise)

Preceding gene: 160876890

Following gene: 160876894

Centisome position: 83.56

GC content: 47.09

Gene sequence:

>1665_bases
ATGTCTAATTTCAGTTTACGTAATAAATTACTACTGTTATCGCTATTCCCGTTAATCCTGACCCTGTGCATTCTCATGAC
AGTTTCTTACTATGTCGAACAAAGCGCCCTTGCAGATGAAGTCACGACCTTTAGAACTAAGCTTATCGGTGAACGTAAAA
CCCAAATAAAAGAAGCCACCGAAATTGCGGCCGGCATAGTGCAATATCAGTTGTCTTTAAAAGAAAATGGCAATGTAAAT
CAAGCGCTCCGTGATATCCGTTTTGGCAGTTCTGGTTACTTCTTTATTTACGACTCCCAAGGCAAAAACCTGTTCCATGC
CGTCATGCCCAACCTCGAAGGGCAAAATAAAATTGATATGACAGATCCCCGCGGCACAAAAATCATTGTTGGTTTACTCG
ATGCTGCTAAAAGGGGCGACGGTAACTTCTCCTTCTATTTCCAAAAACCGAATACCAATGAGCAAATTGAGAAAATTGGT
TACTCAATGATGATCCCTGGCACAGATTGGATGCTAGGCACGGGCGCTTATATCGATGATATCGACGCTGTCGTTGAGGA
TTATCGTGCAACTGTCACTGAGCAGATGATCGAAAAATCCTATGCCATTCTGTTAATTGCGCTGTTACTCGCTGCGATGA
CTGCCGTCGTTATTCTCGCCACCGCCCAGCGCATGGTGGCACCGATTAAAAATATGGCGGACAACTTAAACGATATTGCC
AAAGGCGAAGGCGATTTAACCAAACGTCTTATTGTGAAAGGTGAAGATGAAATTGCACAACTAGGCCAATCCTTTAACCT
GTTTGTCGATAAACTCCAAACCATCATAGGCGATGTGGCAAACGCGACCGCTAAAGTTAAAACCGCCGCCAACGCGATTC
ACGATCAAACCAAAGTCATGTCGAGCCAACTCATCAGCCATAACAATGAAACAGATCAAGTGGTTACCGCTATTACTGAA
ATGTCAGCCACCGCCAGCGAAGTAGCGCAAAATACCACGCAAGTGGCCGAAGCGACCCATGCCGCAACAGGCGATGTGGC
CAATGCTCAGCGCTGCGTCGATGCGTCTTTAGAAGAAATTTCGGCACTCATGGCGCAAATCAACAATGCGGCGGGCAGCA
TTCAATCCTTGAGCGAACAATCTAAAAAAATCAACAATGTGCTGTCAGTGATTGGCGGTATTGCTGAGCAAACTAACCTA
TTAGCATTAAATGCCGCCATCGAAGCCGCTCGCGCCGGAGAACAGGGCAGAGGCTTTGCCGTGGTGGCCGATGAAGTGCG
CAACTTAGCGAGCCGAACGCAATCTAGCACGCTAGAAATCAACGAGATGCTATCCGAACTGCACAAGCTTGTGGCGCTAG
CGGTGAAAACGATGGAAGAAAGTCAGCAAAGCTGCGTACGCTCGGTAGACTCTTCACGCGCAATCTCCGAAAGCCTTGGC
TCAGTGACATCGGCGGTAACGGCAATCAACGACATGAGCACCCAAATTGCAACGGCGGCAACGGAACAAAGCTCTGTGAC
CGAAGAAATCAACCGCAACGTGTTCGCCATCCAAGAGATTGTAAATGAGTTACTTCATTCCAGTGAAGATGCTGCCAGAG
TCAGCCAAACCGTATCGCAAGAAGGGATTAACCTCGGAAAACTCGTCGGCCAGTTTAAGATTTAA

Upstream 100 bases:

>100_bases
CATTTACATTATATTTTTGTTAACTTAAGCACTTAAGAATATGGGAAATTAGCTATACTGCCCTGCAATAAAAAGGATGT
TCATCATGGAGTCGTCAAGC

Downstream 100 bases:

>100_bases
ACTTATTTTGAATGGGTTGTAAGCTAATTAAGACATAGCAACCCATTGGTTTGCTGAAAATGTAAGATAAGGTCTCAGCC
TTGCTGAGACCGATGGCTGT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MSNFSLRNKLLLLSLFPLILTLCILMTVSYYVEQSALADEVTTFRTKLIGERKTQIKEATEIAAGIVQYQLSLKENGNVN
QALRDIRFGSSGYFFIYDSQGKNLFHAVMPNLEGQNKIDMTDPRGTKIIVGLLDAAKRGDGNFSFYFQKPNTNEQIEKIG
YSMMIPGTDWMLGTGAYIDDIDAVVEDYRATVTEQMIEKSYAILLIALLLAAMTAVVILATAQRMVAPIKNMADNLNDIA
KGEGDLTKRLIVKGEDEIAQLGQSFNLFVDKLQTIIGDVANATAKVKTAANAIHDQTKVMSSQLISHNNETDQVVTAITE
MSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEISALMAQINNAAGSIQSLSEQSKKINNVLSVIGGIAEQTNL
LALNAAIEAARAGEQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVALAVKTMEESQQSCVRSVDSSRAISESLG
SVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEDAARVSQTVSQEGINLGKLVGQFKI

Sequences:

>Translated_554_residues
MSNFSLRNKLLLLSLFPLILTLCILMTVSYYVEQSALADEVTTFRTKLIGERKTQIKEATEIAAGIVQYQLSLKENGNVN
QALRDIRFGSSGYFFIYDSQGKNLFHAVMPNLEGQNKIDMTDPRGTKIIVGLLDAAKRGDGNFSFYFQKPNTNEQIEKIG
YSMMIPGTDWMLGTGAYIDDIDAVVEDYRATVTEQMIEKSYAILLIALLLAAMTAVVILATAQRMVAPIKNMADNLNDIA
KGEGDLTKRLIVKGEDEIAQLGQSFNLFVDKLQTIIGDVANATAKVKTAANAIHDQTKVMSSQLISHNNETDQVVTAITE
MSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEISALMAQINNAAGSIQSLSEQSKKINNVLSVIGGIAEQTNL
LALNAAIEAARAGEQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVALAVKTMEESQQSCVRSVDSSRAISESLG
SVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEDAARVSQTVSQEGINLGKLVGQFKI
>Mature_553_residues
SNFSLRNKLLLLSLFPLILTLCILMTVSYYVEQSALADEVTTFRTKLIGERKTQIKEATEIAAGIVQYQLSLKENGNVNQ
ALRDIRFGSSGYFFIYDSQGKNLFHAVMPNLEGQNKIDMTDPRGTKIIVGLLDAAKRGDGNFSFYFQKPNTNEQIEKIGY
SMMIPGTDWMLGTGAYIDDIDAVVEDYRATVTEQMIEKSYAILLIALLLAAMTAVVILATAQRMVAPIKNMADNLNDIAK
GEGDLTKRLIVKGEDEIAQLGQSFNLFVDKLQTIIGDVANATAKVKTAANAIHDQTKVMSSQLISHNNETDQVVTAITEM
SATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEISALMAQINNAAGSIQSLSEQSKKINNVLSVIGGIAEQTNLL
ALNAAIEAARAGEQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVALAVKTMEESQQSCVRSVDSSRAISESLGS
VTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEDAARVSQTVSQEGINLGKLVGQFKI

Specific function: May form a pore through which the hemolysin can be exported [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=333, Percent_Identity=31.5315315315315, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=30.6397306397306, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI1788194, Length=356, Percent_Identity=28.6516853932584, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1787690, Length=371, Percent_Identity=27.4932614555256, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1789453, Length=348, Percent_Identity=28.735632183908, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59833; Mature: 59701

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFSLRNKLLLLSLFPLILTLCILMTVSYYVEQSALADEVTTFRTKLIGERKTQIKEAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAAGIVQYQLSLKENGNVNQALRDIRFGSSGYFFIYDSQGKNLFHAVMPNLEGQNKIDM
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCC
TDPRGTKIIVGLLDAAKRGDGNFSFYFQKPNTNEQIEKIGYSMMIPGTDWMLGTGAYIDD
CCCCCCEEEEEEHHHHCCCCCCEEEEEECCCCHHHHHHCCCEEECCCCCCEEECCCHHHH
IDAVVEDYRATVTEQMIEKSYAILLIALLLAAMTAVVILATAQRMVAPIKNMADNLNDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGEGDLTKRLIVKGEDEIAQLGQSFNLFVDKLQTIIGDVANATAKVKTAANAIHDQTKVM
CCCCHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEI
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SALMAQINNAAGSIQSLSEQSKKINNVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCEE
VVADEVRNLASRTQSSTLEINEMLSELHKLVALAVKTMEESQQSCVRSVDSSRAISESLG
EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEDAARVSQTVSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
EGINLGKLVGQFKI
CCCCHHHHHHHCCC
>Mature Secondary Structure 
SNFSLRNKLLLLSLFPLILTLCILMTVSYYVEQSALADEVTTFRTKLIGERKTQIKEAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAAGIVQYQLSLKENGNVNQALRDIRFGSSGYFFIYDSQGKNLFHAVMPNLEGQNKIDM
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCC
TDPRGTKIIVGLLDAAKRGDGNFSFYFQKPNTNEQIEKIGYSMMIPGTDWMLGTGAYIDD
CCCCCCEEEEEEHHHHCCCCCCEEEEEECCCCHHHHHHCCCEEECCCCCCEEECCCHHHH
IDAVVEDYRATVTEQMIEKSYAILLIALLLAAMTAVVILATAQRMVAPIKNMADNLNDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGEGDLTKRLIVKGEDEIAQLGQSFNLFVDKLQTIIGDVANATAKVKTAANAIHDQTKVM
CCCCHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEI
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SALMAQINNAAGSIQSLSEQSKKINNVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCEE
VVADEVRNLASRTQSSTLEINEMLSELHKLVALAVKTMEESQQSCVRSVDSSRAISESLG
EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEDAARVSQTVSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
EGINLGKLVGQFKI
CCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2162464; 10952301 [H]