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The map label for this gene is adrA [H]

Identifier: 160876890

GI number: 160876890

Start: 4464020

End: 4464928

Strand: Direct

Name: adrA [H]

Synonym: Sbal195_3786

Alternate gene names: 160876890

Gene position: 4464020-4464928 (Clockwise)

Preceding gene: 160876884

Following gene: 160876893

Centisome position: 83.48

GC content: 46.53

Gene sequence:

>909_bases
ATGATCAATATTGAACAGATGGCGTTAATCCTCGATGCACTGCCAGATCCTGCCTTAATATTGTCAAAAAGTGGTCGGTA
CGTGGCTGTATTCGGCGGTAAAGATGGGCGTTATTACCACGATGGTAGTGGCTTAGTCGGTTTGTACCTTGCTGATGTAT
TAAACCCCGATAAAACAAATTACTTCTTAGGCATTATCGAACAAGCCTTAGCTAGCCGAGCGTTACTGATTGAAGAATAT
GAGCTCAGCAATAAAGATGTCAAAGGCTTACCCGACGAAGGCCCAGATCAACCCATTTGGTTTGAGGGGCGAATTCAAGC
GCTAGACTTTCTCGTCAATGATGAGCCAGTGGTGCTCTGGGTCGCCAGTAATATCTCACAGCGACATGAGCTTGAACTGC
AACTGCGTCAGCTCAGCGATACCGATCAGCTCACAGGATTATATAATCGCCGCCGATTAGAACGCGACTTAACCGTTCAA
TTCGACACTTTTCAGCGCCACCGTACGCCCACTTCAATCTTGATCCTCGATTTAGACCACTTAAAGTCTATCAATGACCA
GTTAGGCCACCATGCTGGCGATAAAATTATCATCGCCGTTGCTGAAACCTGTCGCACTCAATTTAGAAAAACCGATAGCG
CGTATCGTTTTGGTGGGGATGAATTTGTGATTGCCCTGCCCGGTGTCGAACAGTCTCAGGCGGTTAAATTTGCAGAATAC
CTCTGCGATTGTTTTTACTCGGCACTGCAACAACTTGCGGTTAATGGCTTGTTTGCCACCGTAAGTATCGGGGTCGCCAG
CATAGAAGCATTGGATACTTCCTATGAAGACACGCTTAAACGGGCCGATGCGGCCCTGTATCAAGCTAAACGTAACGGCA
AAAATCGAGTTATCTCAAATACAGCCTAA

Upstream 100 bases:

>100_bases
GCGGGATTCATTGGCGGCTAAAGCTCCAAAGAGCGGCTCGTAATGATGACTTGGACACGCAGACATAAAGTTAAGTGATT
TTCCACAGGGATCTTAATTG

Downstream 100 bases:

>100_bases
GCGGGTTGAACATTTCAAAGCACACATAGCAATAACAAGCGCCCTTAATAAGTTATAGTCACAAGTGCTCATAAGAAGCA
CGCATCAAAAGACAGCCAAC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MINIEQMALILDALPDPALILSKSGRYVAVFGGKDGRYYHDGSGLVGLYLADVLNPDKTNYFLGIIEQALASRALLIEEY
ELSNKDVKGLPDEGPDQPIWFEGRIQALDFLVNDEPVVLWVASNISQRHELELQLRQLSDTDQLTGLYNRRRLERDLTVQ
FDTFQRHRTPTSILILDLDHLKSINDQLGHHAGDKIIIAVAETCRTQFRKTDSAYRFGGDEFVIALPGVEQSQAVKFAEY
LCDCFYSALQQLAVNGLFATVSIGVASIEALDTSYEDTLKRADAALYQAKRNGKNRVISNTA

Sequences:

>Translated_302_residues
MINIEQMALILDALPDPALILSKSGRYVAVFGGKDGRYYHDGSGLVGLYLADVLNPDKTNYFLGIIEQALASRALLIEEY
ELSNKDVKGLPDEGPDQPIWFEGRIQALDFLVNDEPVVLWVASNISQRHELELQLRQLSDTDQLTGLYNRRRLERDLTVQ
FDTFQRHRTPTSILILDLDHLKSINDQLGHHAGDKIIIAVAETCRTQFRKTDSAYRFGGDEFVIALPGVEQSQAVKFAEY
LCDCFYSALQQLAVNGLFATVSIGVASIEALDTSYEDTLKRADAALYQAKRNGKNRVISNTA
>Mature_302_residues
MINIEQMALILDALPDPALILSKSGRYVAVFGGKDGRYYHDGSGLVGLYLADVLNPDKTNYFLGIIEQALASRALLIEEY
ELSNKDVKGLPDEGPDQPIWFEGRIQALDFLVNDEPVVLWVASNISQRHELELQLRQLSDTDQLTGLYNRRRLERDLTVQ
FDTFQRHRTPTSILILDLDHLKSINDQLGHHAGDKIIIAVAETCRTQFRKTDSAYRFGGDEFVIALPGVEQSQAVKFAEY
LCDCFYSALQQLAVNGLFATVSIGVASIEALDTSYEDTLKRADAALYQAKRNGKNRVISNTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=182, Percent_Identity=35.7142857142857, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87081881, Length=188, Percent_Identity=35.6382978723404, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI145693134, Length=158, Percent_Identity=37.3417721518987, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082007, Length=178, Percent_Identity=34.2696629213483, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787262, Length=172, Percent_Identity=30.2325581395349, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787802, Length=185, Percent_Identity=30.8108108108108, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI87081974, Length=188, Percent_Identity=29.2553191489362, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787816, Length=165, Percent_Identity=30.3030303030303, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081977, Length=170, Percent_Identity=30, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788381, Length=179, Percent_Identity=27.9329608938547, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788956, Length=167, Percent_Identity=31.1377245508982, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787541, Length=181, Percent_Identity=24.8618784530387, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 33770; Mature: 33770

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50887 GGDEF ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIEQMALILDALPDPALILSKSGRYVAVFGGKDGRYYHDGSGLVGLYLADVLNPDKTN
CCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCCH
YFLGIIEQALASRALLIEEYELSNKDVKGLPDEGPDQPIWFEGRIQALDFLVNDEPVVLW
HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCEEEE
VASNISQRHELELQLRQLSDTDQLTGLYNRRRLERDLTVQFDTFQRHRTPTSILILDLDH
EECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCEEEEEEHHH
LKSINDQLGHHAGDKIIIAVAETCRTQFRKTDSAYRFGGDEFVIALPGVEQSQAVKFAEY
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHHH
LCDCFYSALQQLAVNGLFATVSIGVASIEALDTSYEDTLKRADAALYQAKRNGKNRVISN
HHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECC
TA
CC
>Mature Secondary Structure
MINIEQMALILDALPDPALILSKSGRYVAVFGGKDGRYYHDGSGLVGLYLADVLNPDKTN
CCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCCH
YFLGIIEQALASRALLIEEYELSNKDVKGLPDEGPDQPIWFEGRIQALDFLVNDEPVVLW
HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCEEEE
VASNISQRHELELQLRQLSDTDQLTGLYNRRRLERDLTVQFDTFQRHRTPTSILILDLDH
EECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCEEEEEEHHH
LKSINDQLGHHAGDKIIIAVAETCRTQFRKTDSAYRFGGDEFVIALPGVEQSQAVKFAEY
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHHH
LCDCFYSALQQLAVNGLFATVSIGVASIEALDTSYEDTLKRADAALYQAKRNGKNRVISN
HHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECC
TA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]