| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876829
Identifier: 160876829
GI number: 160876829
Start: 4392139
End: 4392501
Strand: Direct
Name: 160876829
Synonym: Sbal195_3725
Alternate gene names: NA
Gene position: 4392139-4392501 (Clockwise)
Preceding gene: 160876827
Following gene: 160876830
Centisome position: 82.14
GC content: 46.01
Gene sequence:
>363_bases GTGATAACTAAAAATACCCTATTTAAGCTGGCTTTAGCCGTAGCCTTTATCGTGATCAGTTATCTGGTATTTTCCAGACC AACCTATTCGCAAAGTATTCCGAATATCGACAAGGTAGGCCATCTTGGGAGCTTTTTTTGCCTCTCCTATCTCTCCTACC TCGCTTTCAAACCTAAGTGGTATTGGCTATCGCTCACATTGGCAAGCTATGCCATTTTAATTGAGCTAGTGCAATCGCGT TTGCCCTACCGTAGCGCCTCTGTGGCGGATGTCATTGCCGACTTTGCGGGCATAGCGCTGTTCTACTTTTGTAATTGGGC CTATGGCAAATACTTTCGTGCGGCTCAGTTGCGGGAAGATTAG
Upstream 100 bases:
>100_bases TAAGTTGAAGGTAAAGCCTAGAATAAAAGCGTAATCATGGATGACTTTAGTGGTGGATTTTCCTATCATTGCCCCACTCT AAGCTAATGCAAACATATTT
Downstream 100 bases:
>100_bases TTTGAACGCTTTAAATGGGCGCTGATACAGAAATCTTAAGGCTGCGAATATGACTCATGCTGTGGATATTGCCATTTTAG GTGCAGGTGCCGTTGGACAA
Product: VanZ family protein
Products: NA
Alternate protein names: VanZ Like Protein
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MITKNTLFKLALAVAFIVISYLVFSRPTYSQSIPNIDKVGHLGSFFCLSYLSYLAFKPKWYWLSLTLASYAILIELVQSR LPYRSASVADVIADFAGIALFYFCNWAYGKYFRAAQLRED
Sequences:
>Translated_120_residues MITKNTLFKLALAVAFIVISYLVFSRPTYSQSIPNIDKVGHLGSFFCLSYLSYLAFKPKWYWLSLTLASYAILIELVQSR LPYRSASVADVIADFAGIALFYFCNWAYGKYFRAAQLRED >Mature_120_residues MITKNTLFKLALAVAFIVISYLVFSRPTYSQSIPNIDKVGHLGSFFCLSYLSYLAFKPKWYWLSLTLASYAILIELVQSR LPYRSASVADVIADFAGIALFYFCNWAYGKYFRAAQLRED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13734; Mature: 13734
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKNTLFKLALAVAFIVISYLVFSRPTYSQSIPNIDKVGHLGSFFCLSYLSYLAFKPKW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH YWLSLTLASYAILIELVQSRLPYRSASVADVIADFAGIALFYFCNWAYGKYFRAAQLRED HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITKNTLFKLALAVAFIVISYLVFSRPTYSQSIPNIDKVGHLGSFFCLSYLSYLAFKPKW CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH YWLSLTLASYAILIELVQSRLPYRSASVADVIADFAGIALFYFCNWAYGKYFRAAQLRED HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA