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The map label for this gene is mdtA [H]

Identifier: 160876753

GI number: 160876753

Start: 4299945

End: 4301156

Strand: Direct

Name: mdtA [H]

Synonym: Sbal195_3647

Alternate gene names: 160876753

Gene position: 4299945-4301156 (Clockwise)

Preceding gene: 160876752

Following gene: 160876754

Centisome position: 80.41

GC content: 48.1

Gene sequence:

>1212_bases
ATGATGAAGACTCTACTGAGGAGAACATCTCCTTTATTAATTTTGCTGCTATTTGGCTTAGGCGCAAAAATATTAATGCA
AACCAAGGAAGCGCCAGAACAAAAACCTGAAGAGATGCCCATTCCTATCGTTGATGTAACGCAAGTGACTCAGCAAACGG
TATCGCTAAACTTACCTTCCTACGGTGTGGTTAACCCAAAATATAAAACCCAACTGGTGACCGAAGTTCAAGGCAGAATG
CTGACCATTTCCCCTAATTTTGTGGCGGGCGGCATAGTTAAGAAAGGCGAACAACTCGCGCAGATCGAGCCCTCAGATTA
CGAGGCTGATTTAATGCAAGCCGAAGCGACGCTGGCCCAAGCTACCGCAGCGCTGAACGAAGAAATTGCCCGCGGTGAAG
TCGCTAAAATCGAATTCAAAGGCTACGACAAGGGCTTACCCCCAGAGTTAGGTCTGCGTATTCCACAGCTTAAAAAAGAG
CAAGCCAACGTTAAATATGCGCAAGCAGCACTGGCGCGTGCCCAACGTAACCTTGAGCGCACGGTTATCCGCGCCCCCTT
TGATGGCATAATCAAAGCGCGCAATGTCGATTTAGGTCAGTATGTTAGCTTAGGTACAAATCTAGGAGAACTCTACGACA
CTAGTGTTGCTGAAATCCGCTTACCGATTTCCAATGACGATCTAGCCTATCTAGAGTCGGTCGATAATCCCGATACCCTA
GTGACGCTGAGCGCCTCTTTGGCGGGTAAAGAAAATACTTGGGATGGCAATATTATCCGCAGCGAAGGCGTGATCGATGC
TGAAAATCGCATGGTGTATTTAGTCGCTGAAATCAAAGACCCTTACCTGCGCGCCAATAAAGTTGCTGGCAGCTTACCGC
TTAAATATGGCAGCTTCGTCAATGCAGTCATCAAAGGTCGCACCGTCGATGGCATAGTAAAACTGCCCCGCCATGTGGTT
CGTAACGATCACGTCGCCTTAGTTAACGACAAAAATATTGTTGAAATGCGCCATGTGAATATCGTTCGTAGCGATCTCGA
CAATGTGTATATCAAGGACAGTCTAAAAACGGGCGAGCGCGTCGCCACCACTCACTTCAACAGCATGGCAAACGGTCAAC
TGGTCAAGGTCTTAGGTGAAGCGGCATTGCCGACTAAGACGCCAAAAGAAGACACGCCTGAGTCGAGTCTTGCGGCCACT
GGAGTGAAATAA

Upstream 100 bases:

>100_bases
TCACTTTTAGACACATTTAATTTACAAAAATAAATTTATTGGCGCGGCCGACTCTGCTACTTTAACCCCATTACGCGATT
AGCATGGATGTAACAATAAT

Downstream 100 bases:

>100_bases
TGGACACTCAAAAAGGGATCTTAGCCTGGTTCGCCCGCAACAGTGTGGCCGCGAACCTGTTAATGTGGGCATTACTCGTC
GGCGGTTTGTTCAGCACTGT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Multidrug transporter mdtA [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MMKTLLRRTSPLLILLLFGLGAKILMQTKEAPEQKPEEMPIPIVDVTQVTQQTVSLNLPSYGVVNPKYKTQLVTEVQGRM
LTISPNFVAGGIVKKGEQLAQIEPSDYEADLMQAEATLAQATAALNEEIARGEVAKIEFKGYDKGLPPELGLRIPQLKKE
QANVKYAQAALARAQRNLERTVIRAPFDGIIKARNVDLGQYVSLGTNLGELYDTSVAEIRLPISNDDLAYLESVDNPDTL
VTLSASLAGKENTWDGNIIRSEGVIDAENRMVYLVAEIKDPYLRANKVAGSLPLKYGSFVNAVIKGRTVDGIVKLPRHVV
RNDHVALVNDKNIVEMRHVNIVRSDLDNVYIKDSLKTGERVATTHFNSMANGQLVKVLGEAALPTKTPKEDTPESSLAAT
GVK

Sequences:

>Translated_403_residues
MMKTLLRRTSPLLILLLFGLGAKILMQTKEAPEQKPEEMPIPIVDVTQVTQQTVSLNLPSYGVVNPKYKTQLVTEVQGRM
LTISPNFVAGGIVKKGEQLAQIEPSDYEADLMQAEATLAQATAALNEEIARGEVAKIEFKGYDKGLPPELGLRIPQLKKE
QANVKYAQAALARAQRNLERTVIRAPFDGIIKARNVDLGQYVSLGTNLGELYDTSVAEIRLPISNDDLAYLESVDNPDTL
VTLSASLAGKENTWDGNIIRSEGVIDAENRMVYLVAEIKDPYLRANKVAGSLPLKYGSFVNAVIKGRTVDGIVKLPRHVV
RNDHVALVNDKNIVEMRHVNIVRSDLDNVYIKDSLKTGERVATTHFNSMANGQLVKVLGEAALPTKTPKEDTPESSLAAT
GVK
>Mature_403_residues
MMKTLLRRTSPLLILLLFGLGAKILMQTKEAPEQKPEEMPIPIVDVTQVTQQTVSLNLPSYGVVNPKYKTQLVTEVQGRM
LTISPNFVAGGIVKKGEQLAQIEPSDYEADLMQAEATLAQATAALNEEIARGEVAKIEFKGYDKGLPPELGLRIPQLKKE
QANVKYAQAALARAQRNLERTVIRAPFDGIIKARNVDLGQYVSLGTNLGELYDTSVAEIRLPISNDDLAYLESVDNPDTL
VTLSASLAGKENTWDGNIIRSEGVIDAENRMVYLVAEIKDPYLRANKVAGSLPLKYGSFVNAVIKGRTVDGIVKLPRHVV
RNDHVALVNDKNIVEMRHVNIVRSDLDNVYIKDSLKTGERVATTHFNSMANGQLVKVLGEAALPTKTPKEDTPESSLAAT
GVK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=386, Percent_Identity=25.1295336787565, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022824
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 44118; Mature: 44118

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKTLLRRTSPLLILLLFGLGAKILMQTKEAPEQKPEEMPIPIVDVTQVTQQTVSLNLPS
CCHHHHHCCCHHHHHHHHHCCHHEEHHCCCCCCCCCCCCCCCEEHHHHHHHHHEEECCCC
YGVVNPKYKTQLVTEVQGRMLTISPNFVAGGIVKKGEQLAQIEPSDYEADLMQAEATLAQ
CCCCCCCHHHHHHHHHCCEEEEECCCCEECCHHHCCCHHCCCCCCCCHHHHHHHHHHHHH
ATAALNEEIARGEVAKIEFKGYDKGLPPELGLRIPQLKKEQANVKYAQAALARAQRNLER
HHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
TVIRAPFDGIIKARNVDLGQYVSLGTNLGELYDTSVAEIRLPISNDDLAYLESVDNPDTL
HEEECCHHHHEEECCCCHHHHHHCCCCHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCEE
VTLSASLAGKENTWDGNIIRSEGVIDAENRMVYLVAEIKDPYLRANKVAGSLPLKYGSFV
EEEEEECCCCCCCCCCCEEECCCEEECCCCEEEEEEECCCCHHHHHHHCCCCCCCHHHHH
NAVIKGRTVDGIVKLPRHVVRNDHVALVNDKNIVEMRHVNIVRSDLDNVYIKDSLKTGER
HHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHCCCCEEEECCCCCCCE
VATTHFNSMANGQLVKVLGEAALPTKTPKEDTPESSLAATGVK
EEHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKTLLRRTSPLLILLLFGLGAKILMQTKEAPEQKPEEMPIPIVDVTQVTQQTVSLNLPS
CCHHHHHCCCHHHHHHHHHCCHHEEHHCCCCCCCCCCCCCCCEEHHHHHHHHHEEECCCC
YGVVNPKYKTQLVTEVQGRMLTISPNFVAGGIVKKGEQLAQIEPSDYEADLMQAEATLAQ
CCCCCCCHHHHHHHHHCCEEEEECCCCEECCHHHCCCHHCCCCCCCCHHHHHHHHHHHHH
ATAALNEEIARGEVAKIEFKGYDKGLPPELGLRIPQLKKEQANVKYAQAALARAQRNLER
HHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
TVIRAPFDGIIKARNVDLGQYVSLGTNLGELYDTSVAEIRLPISNDDLAYLESVDNPDTL
HEEECCHHHHEEECCCCHHHHHHCCCCHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCEE
VTLSASLAGKENTWDGNIIRSEGVIDAENRMVYLVAEIKDPYLRANKVAGSLPLKYGSFV
EEEEEECCCCCCCCCCCEEECCCEEECCCCEEEEEEECCCCHHHHHHHCCCCCCCHHHHH
NAVIKGRTVDGIVKLPRHVVRNDHVALVNDKNIVEMRHVNIVRSDLDNVYIKDSLKTGER
HHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHCCCCEEEECCCCCCCE
VATTHFNSMANGQLVKVLGEAALPTKTPKEDTPESSLAATGVK
EEHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA