BacMap

Definition	Shewanella baltica OS195 chromosome, complete genome.
Accession	NC_009997
Length	5,347,283

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The map label for this gene is srmB [H]

Identifier: 160876752

GI number: 160876752

Start: 4298322

End: 4299581

Strand: Direct

Name: srmB [H]

Synonym: Sbal195_3646

Alternate gene names: 160876752

Gene position: 4298322-4299581 (Clockwise)

Preceding gene: 160876751

Following gene: 160876753

Centisome position: 80.38

GC content: 50.24

Gene sequence:

>1260_bases
ATGCAATTTGAAGATTTCCAGCTTGACCCTAGCTTATTAGAGTCGCTTAATGCCATGGGGCATCATTCACCCACCACTAT
TCAGCAAGAAACTATCCCTTCTGCCCTAGAGCAAAGAGATATTCTCGCGCGCGCCCCGACAGGAACAGGTAAAACAGCGA
GCTTTTTACTGCCATCGTTGCAACATTTAATCGACTTCCCCCGCCGTTTCGCTGGGCAAGCACGTATCCTGATCCTCACG
CCAACCCGTGAGTTAGCCAGCCAAATCCACCGTTATGCGTGTCACTTAGCCACAGGCCAAGGTTTAGACATAGCGATCGT
GACCGGTGGTGTGCCTTACGGACCACAAGAAGAAGCCTTAGCAGGCAACGTCGATATTCTGGTCGCGACCCCTGGCCGCC
TGATGGAATATTTAGACAAAGGCAATTTCAACGCCCAAGAAGTCGATATCTTAATTATCGACGAAGCCGACCGCATGCTA
GACATGGGCTTCTCTTCTGTGGTGCAAGCGATTGCTATCGAAGCCCAAGGCCGCAAACAGAACATGCTGTTCTCTGCCAC
CTTAGAAGGCGGCGGCGTGCAACGTTTTGCCCGCGAAGTGTTAAACGACCCGATTGAAATCGATGTTGAAGCCCCTCGCA
GTGAAAAAGCCAAGATCCACCAATGGATCCACTTAGCCGATGATAAAGAGCATAAATTTGCCCTGCTATGTCATCTGCTG
CGCCAAGAAGATGTTAAACGGACGATTGTGTTCGTGAAAACCCGCGACATCGTTTCTAGCTTAGAAGGCCAGTTACTGAA
AGTCGGCATTCCCTGCGCATTCATGCGTGGCGATATGGAACAGAAAAAACGTTTCCAAGCCTTAAGTCGTTTTACCAAAG
GTGAAGTGAACGTCTTGCTGGCAACCGATGTGGCTGCACGCGGTATCGATATCGACGATATCACCCATGTGATCAACTTC
GACATGCCACGCTCTGCCGATACCTATATTCACCGTATCGGTCGTACTGGCCGCGCTGGCGCCAAAGGTACTGCGATTTC
GTTGGCCGAAGCCCACGATATGCGTATCGTCGGTAAAATCGAGCGTTATATCGAGCAACCGTTGAAACGCCGCGTGATCG
AAGAGCTGCGTCCAAAGAACAAAGAAGCGCGGACACCGGGTAAGAAAAAAGCCAAAGTGAAAGCGAAAGAAGCAGCGAAA
AAAACCAGCAAGAAAGAAGCGGCAAAGAAAGCGAGTAAAATCGCCCGCAAGAAGAAGTAA

Upstream 100 bases:

>100_bases
TACCGGCTGAGAAGATAAACACCGGAGATCTAGATAAGTTATTTAAGTTAACCGCCATAACCTTTATAATGCTTCGCTAT
TATCCGTCGAGACGCTGCGC

Downstream 100 bases:

>100_bases
CCTCAGCTTGAAATAATCCAACTAAAGCCGCTATATGCGGCTTTTTTATTACCTAAATTTAACTCAATGCAATAAATCAA
CTGGCGAGTAAAAGCTAATC

Product: ATP-dependent RNA helicase SrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MQFEDFQLDPSLLESLNAMGHHSPTTIQQETIPSALEQRDILARAPTGTGKTASFLLPSLQHLIDFPRRFAGQARILILT
PTRELASQIHRYACHLATGQGLDIAIVTGGVPYGPQEEALAGNVDILVATPGRLMEYLDKGNFNAQEVDILIIDEADRML
DMGFSSVVQAIAIEAQGRKQNMLFSATLEGGGVQRFAREVLNDPIEIDVEAPRSEKAKIHQWIHLADDKEHKFALLCHLL
RQEDVKRTIVFVKTRDIVSSLEGQLLKVGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDITHVINF
DMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKIERYIEQPLKRRVIEELRPKNKEARTPGKKKAKVKAKEAAK
KTSKKEAAKKASKIARKKK

Sequences:

>Translated_419_residues
MQFEDFQLDPSLLESLNAMGHHSPTTIQQETIPSALEQRDILARAPTGTGKTASFLLPSLQHLIDFPRRFAGQARILILT
PTRELASQIHRYACHLATGQGLDIAIVTGGVPYGPQEEALAGNVDILVATPGRLMEYLDKGNFNAQEVDILIIDEADRML
DMGFSSVVQAIAIEAQGRKQNMLFSATLEGGGVQRFAREVLNDPIEIDVEAPRSEKAKIHQWIHLADDKEHKFALLCHLL
RQEDVKRTIVFVKTRDIVSSLEGQLLKVGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDITHVINF
DMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKIERYIEQPLKRRVIEELRPKNKEARTPGKKKAKVKAKEAAK
KTSKKEAAKKASKIARKKK
>Mature_419_residues
MQFEDFQLDPSLLESLNAMGHHSPTTIQQETIPSALEQRDILARAPTGTGKTASFLLPSLQHLIDFPRRFAGQARILILT
PTRELASQIHRYACHLATGQGLDIAIVTGGVPYGPQEEALAGNVDILVATPGRLMEYLDKGNFNAQEVDILIIDEADRML
DMGFSSVVQAIAIEAQGRKQNMLFSATLEGGGVQRFAREVLNDPIEIDVEAPRSEKAKIHQWIHLADDKEHKFALLCHLL
RQEDVKRTIVFVKTRDIVSSLEGQLLKVGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDITHVINF
DMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKIERYIEQPLKRRVIEELRPKNKEARTPGKKKAKVKAKEAAK
KTSKKEAAKKASKIARKKK

Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI224593278, Length=376, Percent_Identity=36.968085106383, Blast_Score=237, Evalue=1e-62,
Organism=Homo sapiens, GI222352149, Length=384, Percent_Identity=36.71875, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=37.3297002724796, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=37.3297002724796, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI20149629, Length=420, Percent_Identity=34.7619047619048, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=34.9726775956284, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI148613856, Length=349, Percent_Identity=36.1031518624642, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI38201710, Length=349, Percent_Identity=36.1031518624642, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=37.17277486911, Blast_Score=215, Evalue=8e-56,
Organism=Homo sapiens, GI262118318, Length=377, Percent_Identity=35.2785145888594, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=35.9249329758713, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=35.9249329758713, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=35.9249329758713, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI216548263, Length=377, Percent_Identity=35.2785145888594, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=38.0681818181818, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI169881239, Length=374, Percent_Identity=35.8288770053476, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI13514809, Length=374, Percent_Identity=35.8288770053476, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=38.0681818181818, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI13518015, Length=377, Percent_Identity=35.2785145888594, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI262231852, Length=377, Percent_Identity=35.2785145888594, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.3932584269663, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI55749865, Length=369, Percent_Identity=33.0623306233062, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI41327771, Length=398, Percent_Identity=33.6683417085427, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=34.0782122905028, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=32.520325203252, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI7661920, Length=361, Percent_Identity=33.2409972299169, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI41327776, Length=404, Percent_Identity=33.1683168316832, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI13514831, Length=350, Percent_Identity=34, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=34.1463414634146, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI8922886, Length=388, Percent_Identity=31.9587628865979, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI6005743, Length=388, Percent_Identity=31.701030927835, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI21040371, Length=374, Percent_Identity=31.283422459893, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI4758112, Length=371, Percent_Identity=32.0754716981132, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI18375623, Length=371, Percent_Identity=32.0754716981132, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI38569503, Length=374, Percent_Identity=31.8181818181818, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI38569505, Length=374, Percent_Identity=31.8181818181818, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI38327634, Length=367, Percent_Identity=32.1525885558583, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=33.9572192513369, Blast_Score=178, Evalue=8e-45,
Organism=Homo sapiens, GI83700235, Length=364, Percent_Identity=33.7912087912088, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI50659095, Length=368, Percent_Identity=32.8804347826087, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI62241022, Length=372, Percent_Identity=31.1827956989247, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=29.925187032419, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI13129006, Length=385, Percent_Identity=31.9480519480519, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI17505907, Length=400, Percent_Identity=30.5, Blast_Score=165, Evalue=7e-41,
Organism=Homo sapiens, GI41327779, Length=359, Percent_Identity=32.5905292479109, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI62241024, Length=350, Percent_Identity=31.1428571428571, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI164419732, Length=376, Percent_Identity=30.3191489361702, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI256223453, Length=375, Percent_Identity=28.8, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI9966805, Length=325, Percent_Identity=30.4615384615385, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI154759257, Length=471, Percent_Identity=28.0254777070064, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI256773275, Length=404, Percent_Identity=31.6831683168317, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=29.5180722891566, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI20336298, Length=356, Percent_Identity=28.3707865168539, Blast_Score=113, Evalue=4e-25,
Organism=Escherichia coli, GI1788930, Length=383, Percent_Identity=55.8746736292428, Blast_Score=418, Evalue=1e-118,
Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=40.2631578947368, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1790214, Length=368, Percent_Identity=39.6739130434783, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI87082221, Length=369, Percent_Identity=37.940379403794, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1787605, Length=397, Percent_Identity=36.0201511335013, Blast_Score=210, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI115533224, Length=332, Percent_Identity=39.7590361445783, Blast_Score=230, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17552642, Length=366, Percent_Identity=36.6120218579235, Blast_Score=226, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17510559, Length=402, Percent_Identity=35.0746268656716, Blast_Score=225, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI17555296, Length=360, Percent_Identity=36.6666666666667, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI71995724, Length=361, Percent_Identity=35.1800554016621, Blast_Score=212, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17507121, Length=361, Percent_Identity=34.9030470914127, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=34.7826086956522, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=34.7826086956522, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=36.0881542699724, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=36.0881542699724, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=36.0881542699724, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI86570094, Length=360, Percent_Identity=35.8333333333333, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=35.8543417366947, Blast_Score=204, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI17509811, Length=369, Percent_Identity=32.7913279132791, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=33.0645161290323, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17507881, Length=386, Percent_Identity=35.2331606217617, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=32.1428571428571, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI32565321, Length=397, Percent_Identity=31.2342569269521, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17507877, Length=368, Percent_Identity=35.5978260869565, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17505370, Length=346, Percent_Identity=34.1040462427746, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=406, Percent_Identity=32.2660098522167, Blast_Score=187, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=35.15625, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=34.3406593406593, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI71982858, Length=368, Percent_Identity=30.4347826086957, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=29.4736842105263, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17507641, Length=396, Percent_Identity=33.0808080808081, Blast_Score=168, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=33.4224598930481, Blast_Score=158, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI25148203, Length=428, Percent_Identity=26.8691588785047, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI115532548, Length=384, Percent_Identity=29.1666666666667, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI115532546, Length=384, Percent_Identity=29.1666666666667, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=32.5396825396825, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17536099, Length=396, Percent_Identity=29.2929292929293, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17536101, Length=396, Percent_Identity=29.2929292929293, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17536103, Length=398, Percent_Identity=29.8994974874372, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71990816, Length=386, Percent_Identity=29.2746113989637, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17556951, Length=391, Percent_Identity=28.9002557544757, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=28.3667621776504, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI17553716, Length=360, Percent_Identity=27.2222222222222, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=434, Percent_Identity=25.8064516129032, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI25148205, Length=352, Percent_Identity=24.7159090909091, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71982862, Length=213, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=26.8882175226586, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17557982, Length=405, Percent_Identity=23.7037037037037, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=44.9438202247191, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17565430, Length=404, Percent_Identity=23.7623762376238, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6324217, Length=350, Percent_Identity=38.2857142857143, Blast_Score=229, Evalue=7e-61,
Organism=Saccharomyces cerevisiae, GI6323021, Length=373, Percent_Identity=35.1206434316354, Blast_Score=226, Evalue=7e-60,
Organism=Saccharomyces cerevisiae, GI6325138, Length=373, Percent_Identity=37.5335120643432, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6324778, Length=372, Percent_Identity=36.5591397849462, Blast_Score=219, Evalue=8e-58,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=35.5555555555556, Blast_Score=209, Evalue=9e-55,
Organism=Saccharomyces cerevisiae, GI6321360, Length=366, Percent_Identity=34.9726775956284, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6321856, Length=377, Percent_Identity=34.2175066312997, Blast_Score=205, Evalue=9e-54,
Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=32.4175824175824, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=37.4647887323944, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6320449, Length=377, Percent_Identity=31.0344827586207, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6320119, Length=371, Percent_Identity=33.9622641509434, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=32.5905292479109, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=32.8729281767956, Blast_Score=170, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=32.8729281767956, Blast_Score=170, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6324620, Length=372, Percent_Identity=30.3763440860215, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321963, Length=421, Percent_Identity=32.0665083135392, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=432, Percent_Identity=31.0185185185185, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=30.4582210242588, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6319618, Length=404, Percent_Identity=30.1980198019802, Blast_Score=159, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6319714, Length=401, Percent_Identity=29.6758104738155, Blast_Score=156, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=393, Percent_Identity=30.5343511450382, Blast_Score=155, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=26.4563106796117, Blast_Score=147, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320173, Length=244, Percent_Identity=33.1967213114754, Blast_Score=126, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=370, Percent_Identity=27.027027027027, Blast_Score=124, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6322876, Length=466, Percent_Identity=27.0386266094421, Blast_Score=119, Evalue=8e-28,
Organism=Drosophila melanogaster, GI21356161, Length=374, Percent_Identity=36.8983957219251, Blast_Score=240, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24662330, Length=366, Percent_Identity=37.1584699453552, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=36.0795454545455, Blast_Score=227, Evalue=9e-60,
Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=38.10888252149, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24585582, Length=376, Percent_Identity=34.0425531914894, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24644479, Length=352, Percent_Identity=35.7954545454545, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644483, Length=352, Percent_Identity=35.7954545454545, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644487, Length=352, Percent_Identity=35.7954545454545, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI45551833, Length=352, Percent_Identity=35.7954545454545, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644485, Length=352, Percent_Identity=35.7954545454545, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI281361218, Length=352, Percent_Identity=35.7954545454545, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644481, Length=352, Percent_Identity=35.7954545454545, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=36.3888888888889, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=35.6940509915014, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=35.0140056022409, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=34.0369393139842, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24645031, Length=361, Percent_Identity=33.7950138504155, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.3932584269663, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=32.9639889196676, Blast_Score=195, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24583279, Length=368, Percent_Identity=32.6086956521739, Blast_Score=195, Evalue=5e-50,
Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=33.4239130434783, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI17136814, Length=385, Percent_Identity=33.5064935064935, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24584994, Length=372, Percent_Identity=32.7956989247312, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=33.8658146964856, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=33.7016574585635, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=33.7016574585635, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=33.7016574585635, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=33.7016574585635, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24581954, Length=368, Percent_Identity=31.25, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI24581952, Length=368, Percent_Identity=31.25, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI24581956, Length=368, Percent_Identity=31.25, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=29.620253164557, Blast_Score=167, Evalue=8e-42,
Organism=Drosophila melanogaster, GI24642822, Length=365, Percent_Identity=29.8630136986301, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI28571808, Length=351, Percent_Identity=31.3390313390313, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI28571809, Length=351, Percent_Identity=31.3390313390313, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI24666101, Length=357, Percent_Identity=31.6526610644258, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI20130173, Length=372, Percent_Identity=30.1075268817204, Blast_Score=151, Evalue=6e-37,
Organism=Drosophila melanogaster, GI19920478, Length=387, Percent_Identity=32.5581395348837, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=28.6908077994429, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI17136666, Length=405, Percent_Identity=29.3827160493827, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI21355559, Length=389, Percent_Identity=31.6195372750643, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24668515, Length=323, Percent_Identity=28.4829721362229, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=25.1428571428571, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI18859659, Length=199, Percent_Identity=33.1658291457286, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571338, Length=199, Percent_Identity=33.1658291457286, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 46602; Mature: 46602

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFEDFQLDPSLLESLNAMGHHSPTTIQQETIPSALEQRDILARAPTGTGKTASFLLPSL
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QHLIDFPRRFAGQARILILTPTRELASQIHRYACHLATGQGLDIAIVTGGVPYGPQEEAL
HHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
AGNVDILVATPGRLMEYLDKGNFNAQEVDILIIDEADRMLDMGFSSVVQAIAIEAQGRKQ
CCCCEEEEECCHHHHHHHHCCCCCCEEEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCC
NMLFSATLEGGGVQRFAREVLNDPIEIDVEAPRSEKAKIHQWIHLADDKEHKFALLCHLL
CEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
RQEDVKRTIVFVKTRDIVSSLEGQLLKVGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLL
HHHCCCEEEEEEEHHHHHHHHCCCEEEECCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
ATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKI
EECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHCHHHHHHH
ERYIEQPLKRRVIEELRPKNKEARTPGKKKAKVKAKEAAKKTSKKEAAKKASKIARKKK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQFEDFQLDPSLLESLNAMGHHSPTTIQQETIPSALEQRDILARAPTGTGKTASFLLPSL
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QHLIDFPRRFAGQARILILTPTRELASQIHRYACHLATGQGLDIAIVTGGVPYGPQEEAL
HHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
AGNVDILVATPGRLMEYLDKGNFNAQEVDILIIDEADRMLDMGFSSVVQAIAIEAQGRKQ
CCCCEEEEECCHHHHHHHHCCCCCCEEEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCC
NMLFSATLEGGGVQRFAREVLNDPIEIDVEAPRSEKAKIHQWIHLADDKEHKFALLCHLL
CEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
RQEDVKRTIVFVKTRDIVSSLEGQLLKVGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLL
HHHCCCEEEEEEEHHHHHHHHCCCEEEECCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
ATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKI
EECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHCHHHHHHH
ERYIEQPLKRRVIEELRPKNKEARTPGKKKAKVKAKEAAKKTSKKEAAKKASKIARKKK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]