| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876736
Identifier: 160876736
GI number: 160876736
Start: 4278584
End: 4279321
Strand: Direct
Name: 160876736
Synonym: Sbal195_3630
Alternate gene names: NA
Gene position: 4278584-4279321 (Clockwise)
Preceding gene: 160876735
Following gene: 160876738
Centisome position: 80.01
GC content: 50.27
Gene sequence:
>738_bases ATGTTAGTCACTCAGGAAACTCAGGATATCTCCACGCCTTCAGGGCTAATGCGCACCTATATCTACCGCCCAGAAGCACA GGGGCAATTTCCAAGCATCATCTTTTATTCCGAGATATTTCAGCAAACTGCGCCTATTGCGCGCACTGCGACAATTCTTG CTGGCCACGGTTTTGTCGTGTTTGTGCCGGAAGTGTTCCATGAACTCAATCCTTTAGGCACAGTGCTCGCCTACGATGAA CCGGGTAAAGACAAAGGCAACGCCGATAAATTTGCGAAACCTTTAGAACACCACGACAGCGACACCCAAGCATTAGTCGA CTTTGCCCATCAACAAGCTTACTGCAATGGCAAAGTGGGCAGCATGGGCGTGTGTATCGGCGGCCACTTAGCCTACCGCG CCGCACTCAACCCCGCTATTTTAGGTGCATTTTGCCTCTATCCGACCGACATTCACTCCAACACCCTGCCCTGCGCCTAC GGCAATGACTCTCTGAGCCGCAGCGGTGATATTCAAGGGGAATTAGTGTTAGTGTTTGGTAAGCAAGATCCCCATGTATC AGCGGAAGGTCGAGTGTTAATCCACCAGCAATTAATGGCGCTGAACCGTAATTTCACTTGGCTTGAAGTCAACGCTCAAC ACGCCTTTATGCGTGATGAAGGCGATAGATACGATCCGGCTTTAGCGCTGCAAATGTACTTACAAGCGACGGCATTTTTT CAGCGAGTGTTGCGATAG
Upstream 100 bases:
>100_bases CAGGGGAACGCTCAGGTAACGAATTGTTTTAACTGACAGATAAAATCCTGACTGCTAAAGTGAGGCTTCAACGTTTGAAG CCTCACAGAGAGAACTAAAT
Downstream 100 bases:
>100_bases AAGAGTTAAATAAACAACAAGGAAGTGATTATGAGAGAGCGTATTTTTAGATGACTAGCTGGAATACTCAGTGTAAGCCT GTTGCTTGCGACTGGCCAAC
Product: dienelactone hydrolase
Products: NA
Alternate protein names: Dienelactone Hydrolase; Dienelactone Hydrolase Family Protein; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolase Or ; Carboxymethylenebutenolidase Family Protein; Threonyl-TRNA Synthetase Class IIA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLVTQETQDISTPSGLMRTYIYRPEAQGQFPSIIFYSEIFQQTAPIARTATILAGHGFVVFVPEVFHELNPLGTVLAYDE PGKDKGNADKFAKPLEHHDSDTQALVDFAHQQAYCNGKVGSMGVCIGGHLAYRAALNPAILGAFCLYPTDIHSNTLPCAY GNDSLSRSGDIQGELVLVFGKQDPHVSAEGRVLIHQQLMALNRNFTWLEVNAQHAFMRDEGDRYDPALALQMYLQATAFF QRVLR
Sequences:
>Translated_245_residues MLVTQETQDISTPSGLMRTYIYRPEAQGQFPSIIFYSEIFQQTAPIARTATILAGHGFVVFVPEVFHELNPLGTVLAYDE PGKDKGNADKFAKPLEHHDSDTQALVDFAHQQAYCNGKVGSMGVCIGGHLAYRAALNPAILGAFCLYPTDIHSNTLPCAY GNDSLSRSGDIQGELVLVFGKQDPHVSAEGRVLIHQQLMALNRNFTWLEVNAQHAFMRDEGDRYDPALALQMYLQATAFF QRVLR >Mature_245_residues MLVTQETQDISTPSGLMRTYIYRPEAQGQFPSIIFYSEIFQQTAPIARTATILAGHGFVVFVPEVFHELNPLGTVLAYDE PGKDKGNADKFAKPLEHHDSDTQALVDFAHQQAYCNGKVGSMGVCIGGHLAYRAALNPAILGAFCLYPTDIHSNTLPCAY GNDSLSRSGDIQGELVLVFGKQDPHVSAEGRVLIHQQLMALNRNFTWLEVNAQHAFMRDEGDRYDPALALQMYLQATAFF QRVLR
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320117, Length=258, Percent_Identity=41.0852713178295, Blast_Score=175, Evalue=6e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27148; Mature: 27148
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTQETQDISTPSGLMRTYIYRPEAQGQFPSIIFYSEIFQQTAPIARTATILAGHGFVV CCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCHHHHEEEEECCCEEE FVPEVFHELNPLGTVLAYDEPGKDKGNADKFAKPLEHHDSDTQALVDFAHQQAYCNGKVG EHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC SMGVCIGGHLAYRAALNPAILGAFCLYPTDIHSNTLPCAYGNDSLSRSGDIQGELVLVFG CEEEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEC KQDPHVSAEGRVLIHQQLMALNRNFTWLEVNAQHAFMRDEGDRYDPALALQMYLQATAFF CCCCCCCCCCEEHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHH QRVLR HHHHC >Mature Secondary Structure MLVTQETQDISTPSGLMRTYIYRPEAQGQFPSIIFYSEIFQQTAPIARTATILAGHGFVV CCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCHHHHEEEEECCCEEE FVPEVFHELNPLGTVLAYDEPGKDKGNADKFAKPLEHHDSDTQALVDFAHQQAYCNGKVG EHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC SMGVCIGGHLAYRAALNPAILGAFCLYPTDIHSNTLPCAYGNDSLSRSGDIQGELVLVFG CEEEEECCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEC KQDPHVSAEGRVLIHQQLMALNRNFTWLEVNAQHAFMRDEGDRYDPALALQMYLQATAFF CCCCCCCCCCEEHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHH QRVLR HHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA