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The map label for this gene is ycfM [C]

Identifier: 160876707

GI number: 160876707

Start: 4236427

End: 4237032

Strand: Direct

Name: ycfM [C]

Synonym: Sbal195_3601

Alternate gene names: 160876707

Gene position: 4236427-4237032 (Clockwise)

Preceding gene: 160876706

Following gene: 160876708

Centisome position: 79.23

GC content: 41.91

Gene sequence:

>606_bases
ATGGAACTGACTATGAAACAATTTAAACTGATTTTTGTGCTGGCTGCCGTTATGGGTCTGGCTGCATGTCAATCTAAAGT
CGAATATGGCGATGCCACCGAAGTTGAAACCGTCAATGAGAATTTTGGCTCAACGGATCTACAAGCTATTGCAGCCAAGA
TGGTGGATAGCATGATGACTTTCCCTCCTATCGTGGCCATGACAGCCAATAGCCGTCCGATTTTATTTGTCGACAGCATC
AAGAACAAAACCTCAGAGCACATTGATACTGAGTCTGTTACTGACTCTATCAGCAACAAACTATTGCGCTCAGGCAAGTT
CCGTTTTATCGACATGACTAAAGTAGATTCAGTCCGTAAGCAATTGGATTACCAAAACAACACTGGCATGGTTGATCCAT
CAACCGCCATCAAATTTGGTCGTCAAATCGGCGCGCAATACATGTTATACGGCAATTTATCTAGCATAGTTAAGCAAGAC
GGTAGCACTAAAGATGTGTACTACAAGATGACAATGCGTTTAATGGATTTAGAAACAGGCCTGATCGAATGGTCTGATGA
AAAAGAAATCCGTAAGATGAAGTCTAAGTCTTTCTTAGGCATGTAA

Upstream 100 bases:

>100_bases
TGATACTGGTAATTACACCCGAATTTATTCAATAATCATTTAGCCTAGCGGTTGTGGTATTTGAATAAGACGTGTGTCAT
TAAGTTTATACAATCACAAA

Downstream 100 bases:

>100_bases
TTGTCTATTGGCGCTTACTACCGCCAAACAGAGATCCCAAGAAGCCAGCTTAAACGCTGGCTTTTTTTTACATTTTTAAC
ATTGGTTATCCAAGGTAAAT

Product: membrane lipoprotein lipid attachment site

Products: NA

Alternate protein names: Membrane Lipoprotein Lipid Attachment Site

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MELTMKQFKLIFVLAAVMGLAACQSKVEYGDATEVETVNENFGSTDLQAIAAKMVDSMMTFPPIVAMTANSRPILFVDSI
KNKTSEHIDTESVTDSISNKLLRSGKFRFIDMTKVDSVRKQLDYQNNTGMVDPSTAIKFGRQIGAQYMLYGNLSSIVKQD
GSTKDVYYKMTMRLMDLETGLIEWSDEKEIRKMKSKSFLGM

Sequences:

>Translated_201_residues
MELTMKQFKLIFVLAAVMGLAACQSKVEYGDATEVETVNENFGSTDLQAIAAKMVDSMMTFPPIVAMTANSRPILFVDSI
KNKTSEHIDTESVTDSISNKLLRSGKFRFIDMTKVDSVRKQLDYQNNTGMVDPSTAIKFGRQIGAQYMLYGNLSSIVKQD
GSTKDVYYKMTMRLMDLETGLIEWSDEKEIRKMKSKSFLGM
>Mature_201_residues
MELTMKQFKLIFVLAAVMGLAACQSKVEYGDATEVETVNENFGSTDLQAIAAKMVDSMMTFPPIVAMTANSRPILFVDSI
KNKTSEHIDTESVTDSISNKLLRSGKFRFIDMTKVDSVRKQLDYQNNTGMVDPSTAIKFGRQIGAQYMLYGNLSSIVKQD
GSTKDVYYKMTMRLMDLETGLIEWSDEKEIRKMKSKSFLGM

Specific function: Unknown

COG id: COG3417

COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787348, Length=127, Percent_Identity=28.3464566929134, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22595; Mature: 22595

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTMKQFKLIFVLAAVMGLAACQSKVEYGDATEVETVNENFGSTDLQAIAAKMVDSMMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHC
FPPIVAMTANSRPILFVDSIKNKTSEHIDTESVTDSISNKLLRSGKFRFIDMTKVDSVRK
CCCEEEEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH
QLDYQNNTGMVDPSTAIKFGRQIGAQYMLYGNLSSIVKQDGSTKDVYYKMTMRLMDLETG
HHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHC
LIEWSDEKEIRKMKSKSFLGM
CCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MELTMKQFKLIFVLAAVMGLAACQSKVEYGDATEVETVNENFGSTDLQAIAAKMVDSMMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHC
FPPIVAMTANSRPILFVDSIKNKTSEHIDTESVTDSISNKLLRSGKFRFIDMTKVDSVRK
CCCEEEEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH
QLDYQNNTGMVDPSTAIKFGRQIGAQYMLYGNLSSIVKQDGSTKDVYYKMTMRLMDLETG
HHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHC
LIEWSDEKEIRKMKSKSFLGM
CCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA