Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is yneA [C]

Identifier: 160876639

GI number: 160876639

Start: 4153676

End: 4154686

Strand: Direct

Name: yneA [C]

Synonym: Sbal195_3533

Alternate gene names: 160876639

Gene position: 4153676-4154686 (Clockwise)

Preceding gene: 160876638

Following gene: 160876640

Centisome position: 77.68

GC content: 38.48

Gene sequence:

>1011_bases
GTGGTGAGATTATTTTTGTTGTTCATTGCATTAAGTCAATTACCAATATCCTCTGCCTATGGAAAAGAGCTGAAATTTGC
TGTTGTGCCTAAATTTTATAGTATTTTTTTTGATCAAAGCAAAAATGGCTGTATAGATGCAGCGGCTCAAATAGAAGGCG
TAGAATGTATATATCGAGGACCTGAAATTAGCAATGTTAGATTGCAAGATCAGGTAATAAATCAACTGATTGATGAAGGT
ATCGATGGTATCGCTGTCGCGGTTACGCAGTCTAAATACCTGGTTGAAAATAGCCTAAAAAGAGCCAAAGAAGCCGGAAT
TCCAATTGTTACCTATGACTCTGATTTTGATGCTTCTATCAAAGAAGAACCTAAGAATTTACGCTTCGCTTATATAGGCA
CAGACAATTTTGAACTAGGTAAATCATTGGGTGAACAGTTAAAAAAACTACGGCCAAATGGGGGAACTCTGATAATGCAT
TCTGGGCGGCCAGATTCTCCCAATCTGAATTTAAGACTTATGGGTGTACGTTCCGCCTTATCAGGAAAAAAATACGATGC
TCCTCCTGGTGAATTGCTTAATGGCGATTTAGGCTGGACAGAAGTTAGAGAACCTTTGTTTAATTTTGATCAACTTAGTC
AAGCCGTTAAACAAATGGAGTCAGTGATGAAAGGTAAGCCTGTGAAGGCAGACTCTTTTATCGCAGTGGGTGGTTGGGCG
CAAAATAATGATGCGCTCTATCGTGAAATGATTGCTCCATACCAAGAAAAAATTAATAACAAAGAAATCGTCATTATTAT
TACCGATACATCTCCAGAGCAGTTAACTATGCTGAAAGATGGTCTTGCTCATGTCAATGTGGGTCAAAATCCATATGAAA
TGGGAAAACAGGCAATTTTGACGCTTTATAAAATTGTCACAAAACAAAAGTATGAAGAAACAATATACACACCTGTTACG
TTTTGCACTCCTCAAAACGCTGACACCTGCGACAAGCGTACCGGAATGTGA

Upstream 100 bases:

>100_bases
GTTCAATAACACCGTTGCATCTCATGTCTTTAAATCTATTCTTTTGCTACATTCTGTTGTAAAGCTTTAAGTCGCTGTCT
CATTATTTTTAGGAGGAAGT

Downstream 100 bases:

>100_bases
CGCAAAAATGATGGATTAGGCCAGTACACCTCTCAAAAGAGCCATTGATCATAATTGATGGCTCACGCTCAATTATCTAT
CTTTATAAACAGAGTCTATG

Product: sugar-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRGPEISNVRLQDQVINQLIDEG
IDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASIKEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMH
SGRPDSPNLNLRLMGVRSALSGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA
QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAILTLYKIVTKQKYEETIYTPVT
FCTPQNADTCDKRTGM

Sequences:

>Translated_336_residues
MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRGPEISNVRLQDQVINQLIDEG
IDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASIKEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMH
SGRPDSPNLNLRLMGVRSALSGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA
QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAILTLYKIVTKQKYEETIYTPVT
FCTPQNADTCDKRTGM
>Mature_336_residues
MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRGPEISNVRLQDQVINQLIDEG
IDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASIKEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMH
SGRPDSPNLNLRLMGVRSALSGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA
QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAILTLYKIVTKQKYEETIYTPVT
FCTPQNADTCDKRTGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37403; Mature: 37403

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRG
CHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHCCCCEEEECC
PEISNVRLQDQVINQLIDEGIDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASI
CCCCCEEHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHH
KEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMHSGRPDSPNLNLRLMGVRSAL
HCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEHHHH
SGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA
CCCCCCCCCHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAIL
CCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCEEECCCCHHHHHHHHHH
TLYKIVTKQKYEETIYTPVTFCTPQNADTCDKRTGM
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCCCC
>Mature Secondary Structure
MVRLFLLFIALSQLPISSAYGKELKFAVVPKFYSIFFDQSKNGCIDAAAQIEGVECIYRG
CHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHCCCCEEEECC
PEISNVRLQDQVINQLIDEGIDGIAVAVTQSKYLVENSLKRAKEAGIPIVTYDSDFDASI
CCCCCEEHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHH
KEEPKNLRFAYIGTDNFELGKSLGEQLKKLRPNGGTLIMHSGRPDSPNLNLRLMGVRSAL
HCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEHHHH
SGKKYDAPPGELLNGDLGWTEVREPLFNFDQLSQAVKQMESVMKGKPVKADSFIAVGGWA
CCCCCCCCCHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
QNNDALYREMIAPYQEKINNKEIVIIITDTSPEQLTMLKDGLAHVNVGQNPYEMGKQAIL
CCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCEEECCCCHHHHHHHHHH
TLYKIVTKQKYEETIYTPVTFCTPQNADTCDKRTGM
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA