| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876625
Identifier: 160876625
GI number: 160876625
Start: 4135100
End: 4136296
Strand: Reverse
Name: 160876625
Synonym: Sbal195_3519
Alternate gene names: NA
Gene position: 4136296-4135100 (Counterclockwise)
Preceding gene: 160876630
Following gene: 160876621
Centisome position: 77.35
GC content: 49.12
Gene sequence:
>1197_bases GTGGCACACAATATCGATGTTGATGAGTTGGACTCCATAGCTGCGGCTGTTGAGCATAATGACATCGCCCAGATGAGAGT CGCCAATATCAAGATAGCCAGTATCAATCTGTTTAACTTTATTGAGCCGCCTTTGGCTTACTACGACTTTGAAAACATCT ATAGTCATGGCCAGTGGCAGAAAAAGTGCCAATGGCTGAGTGAGTTTCTCGCCCATCGCCAGCCCGATATTGTCGGATTT CAAGAAGTGTTTAGTCCAGAACCGCTCAAACGAATCGCCAGCGAGCAAGGGCTAGTGCATTTTGCTGTCATTGATGCGCC AACTCTTATCAGTGATTACATTTATCGCAGCCCTGTGGTTGCACTTGCGTCCCGTTATCCCATAGTGGAAATCAGCAGTG TCGAACCTGATGCGCGCTTAGTGGCGGCGATGGGATTATCGAGTGAATTTGCTTTTAGCCGTAAGGTGCTGCGCGCAACC GTTGAGGTGCCGCACATTGGTAAGTGTGATTTTTATGTGGTGCACTTTAAGTCAAAACGCGCTGGATTAGCGCTCGAGCC TAAGCTATTTGAACATCAGCCACTTGCTTTAGATAACTTGGCACCCGCAGCGAGCATGAAACTGCATTCAGAAACCCAAT TACTCACCGAGCAAGCTTTAGGCCGCTGGGCATCAACCATGCAGCGCGGCGCGGAAGCTGCGTTATTATTCAATGGCATA TTAGTACGCAGACAAGAATCTAAACATCCCGTCATCGTGATGGGAGATTTTAACGACAGCCTGACGATGGGCGCCTTAGA TGCATTAACGATACAGGGCGAGAGTATCCACAGTAATGATATTAAAGCCGCTGGCCTTGGGCATTTATCGGATGCGGCGT TAGCGGCGGTGTTTGCTCAATATCAGCTTAAAGATGCCTATGAGTTATGTCTTGAGGCCAATCAGCAGGACAGTTTGACG GGCAATACCGCTTACCATAGGGATCACAGAGCGGCGACCCATTACTATGGCCCCAAAGGTTCTGTGCTGGATTATATTTT GCTTTCGAGCGAGTTCGATGCGAGCCATGGCCGCAGTTTGGCTCAAGTGGTGGATTATCAAACCTGCGACAGGCACTTAG TCAGACCCGAATATGAGCGCGATGCCTACAGTACAGATCATGCGCCAGTGATTGTTGAGTTGGCGCTGCGGAGTTAA
Upstream 100 bases:
>100_bases GCATCGGGTATACCCTTGTAGTGTCTGTACCTGTGAGTCAAAGTGATCATTCAGACAGGTTCAGACAGGTCGCCGTATTC AGATTTGGAGGTATTAAGCT
Downstream 100 bases:
>100_bases TTACTCATTCAGTTGAGCTCGCTAAATCAAGCCAAATAAAACAACTTAAACTCACTCAAGTTAATTCACTTTAAATCTGG CTAACACTCAATCTCCAAAC
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MAHNIDVDELDSIAAAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGF QEVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRAT VEVPHIGKCDFYVVHFKSKRAGLALEPKLFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGI LVRRQESKHPVIVMGDFNDSLTMGALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELCLEANQQDSLT GNTAYHRDHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS
Sequences:
>Translated_398_residues MAHNIDVDELDSIAAAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGF QEVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRAT VEVPHIGKCDFYVVHFKSKRAGLALEPKLFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGI LVRRQESKHPVIVMGDFNDSLTMGALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELCLEANQQDSLT GNTAYHRDHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS >Mature_397_residues AHNIDVDELDSIAAAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQKKCQWLSEFLAHRQPDIVGFQ EVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATV EVPHIGKCDFYVVHFKSKRAGLALEPKLFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGIL VRRQESKHPVIVMGDFNDSLTMGALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELCLEANQQDSLTG NTAYHRDHRAATHYYGPKGSVLDYILLSSEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44275; Mature: 44143
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHNIDVDELDSIAAAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQ CCCCCCHHHHHHHHHHHHCCCHHHEEEEEEEEEEEEHHHHCCCCHHHHCHHHHHCCCCHH KKCQWLSEFLAHRQPDIVGFQEVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVV HHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHCCEEEEEEECCHHHHHHHHHHCHHH ALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKCDFYVVHFKSKR HHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC AGLALEPKLFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGI CCCEECCHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHCE LVRRQESKHPVIVMGDFNDSLTMGALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQ EEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH YQLKDAYELCLEANQQDSLTGNTAYHRDHRAATHYYGPKGSVLDYILLSSEFDASHGRSL HHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCHH AQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS HHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure AHNIDVDELDSIAAAVEHNDIAQMRVANIKIASINLFNFIEPPLAYYDFENIYSHGQWQ CCCCCHHHHHHHHHHHHCCCHHHEEEEEEEEEEEEHHHHCCCCHHHHCHHHHHCCCCHH KKCQWLSEFLAHRQPDIVGFQEVFSPEPLKRIASEQGLVHFAVIDAPTLISDYIYRSPVV HHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHCCEEEEEEECCHHHHHHHHHHCHHH ALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKCDFYVVHFKSKR HHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC AGLALEPKLFEHQPLALDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGI CCCEECCHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHCE LVRRQESKHPVIVMGDFNDSLTMGALDALTIQGESIHSNDIKAAGLGHLSDAALAAVFAQ EEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH YQLKDAYELCLEANQQDSLTGNTAYHRDHRAATHYYGPKGSVLDYILLSSEFDASHGRSL HHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCHH AQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS HHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA