| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876602
Identifier: 160876602
GI number: 160876602
Start: 4115293
End: 4115808
Strand: Reverse
Name: 160876602
Synonym: Sbal195_3496
Alternate gene names: NA
Gene position: 4115808-4115293 (Counterclockwise)
Preceding gene: 160876603
Following gene: 160876600
Centisome position: 76.97
GC content: 32.95
Gene sequence:
>516_bases TTGGAAAAGTCTGATGTTACGTGTTTTCATACAGGATGGTCTGTGTTTTTAGATATTACTATGTGGAGTAAGTGGCTAGA TATTGCAGCGAATATAGCGACAATAGGGGCTGTTTTGATCGCATTTTATGCGGCACATGTTGCATATAATCAACTTCTAT CAAATATAAAAGAAACTAGAAATGCAACTGCATATAATTTATATAATCAATATTTATCATTGTGTATGGCGAATCCAAAT TTTTCATATGGTATGGAAATCCCTAATTCACATTGTGTTGAATATGCAAAGTACTGCTGGTTTGTTTCTACTATGCTTTT TTCTTTTGAGCAGATAGTGGAAACTCAAAATAATAATCCTCAATGGATTAGCACGATTAAATCTCAATTAAGAATACATA AAAAACATTTAAAAGTTTCTACATCAGTATCTAATGGAGACTGGGAACCTAGGCTTTGTCTTATTATTAATGAGGTTATT GCAGAGGCTGATAATGAGGTTGTTGCTGAAGGCTGA
Upstream 100 bases:
>100_bases GATGATAATTCTGATTTTAAACCTGTGCCTATAGGTTTTAAAATGTCAGATTATCGAAAGTAAACTAATAATTTTAACTG CTTTGCGATAGGGGTTCAAC
Downstream 100 bases:
>100_bases TAAATAGATCAATGAACAACTAATGATTTACGAGTTTTCCTTGTGTATTTTAATTTTAAGCCAGATGTTGTTAGTTCTGG CTTAATTTATTTGATAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MEKSDVTCFHTGWSVFLDITMWSKWLDIAANIATIGAVLIAFYAAHVAYNQLLSNIKETRNATAYNLYNQYLSLCMANPN FSYGMEIPNSHCVEYAKYCWFVSTMLFSFEQIVETQNNNPQWISTIKSQLRIHKKHLKVSTSVSNGDWEPRLCLIINEVI AEADNEVVAEG
Sequences:
>Translated_171_residues MEKSDVTCFHTGWSVFLDITMWSKWLDIAANIATIGAVLIAFYAAHVAYNQLLSNIKETRNATAYNLYNQYLSLCMANPN FSYGMEIPNSHCVEYAKYCWFVSTMLFSFEQIVETQNNNPQWISTIKSQLRIHKKHLKVSTSVSNGDWEPRLCLIINEVI AEADNEVVAEG >Mature_171_residues MEKSDVTCFHTGWSVFLDITMWSKWLDIAANIATIGAVLIAFYAAHVAYNQLLSNIKETRNATAYNLYNQYLSLCMANPN FSYGMEIPNSHCVEYAKYCWFVSTMLFSFEQIVETQNNNPQWISTIKSQLRIHKKHLKVSTSVSNGDWEPRLCLIINEVI AEADNEVVAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19513; Mature: 19513
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSDVTCFHTGWSVFLDITMWSKWLDIAANIATIGAVLIAFYAAHVAYNQLLSNIKETR CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NATAYNLYNQYLSLCMANPNFSYGMEIPNSHCVEYAKYCWFVSTMLFSFEQIVETQNNNP CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QWISTIKSQLRIHKKHLKVSTSVSNGDWEPRLCLIINEVIAEADNEVVAEG HHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEKSDVTCFHTGWSVFLDITMWSKWLDIAANIATIGAVLIAFYAAHVAYNQLLSNIKETR CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NATAYNLYNQYLSLCMANPNFSYGMEIPNSHCVEYAKYCWFVSTMLFSFEQIVETQNNNP CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QWISTIKSQLRIHKKHLKVSTSVSNGDWEPRLCLIINEVIAEADNEVVAEG HHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA