Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160876570

Identifier: 160876570

GI number: 160876570

Start: 4082545

End: 4083819

Strand: Reverse

Name: 160876570

Synonym: Sbal195_3464

Alternate gene names: NA

Gene position: 4083819-4082545 (Counterclockwise)

Preceding gene: 160876571

Following gene: 160876568

Centisome position: 76.37

GC content: 47.76

Gene sequence:

>1275_bases
ATGAGTTCTAACATTAGCCGTTCTAATATCTGCTCGAATATAAACACTCGTCCTGAGTTACCGTCAGGTTTTGCCGAGCA
AGAACTGAGTCGCTCTATTGGCCGTAGCCGTATCAATAGTATCGATATGATGCGCGGCCTGGTGATGCTCATCATGCTGC
TCGACCATGTGCGGGAACGGTTTTTCCTGCATATGCAGGTGAGCGACCCCATGGATTTGAGTTCGACCTCTTGGGGACTG
TTTCTAAGCCGCTTTGCCGCGCATTTTTGTGCGCCAGTGTTTGTGTTTCTAACGGGCATTTCTGCTTGGCTTTATGCCAA
TCGCAGTCATGGACAGCCGCGTTCAGCGCGGGCGTTTTTGATTAAACGTGGCTTATTTTTAATCGCGCTCGAAATCTTAG
TGATTAACATCTCTTGGATGGGCAACTACCATACGCTTTGGCTGCAGGTCATTTGGGTGATCGGCCTGAGCATGTTAACG
CTGGCGGCACTGATAAATCTGCCTAGATCTTGGATGGCTGTTTTAGGGTTAGCGATTGTCTTTGGTCATAATCTGTTGAC
GCCAATTCATTTTCAGCCGAGTGAATGGGCTTACGGTTTGTGGACCATATTGCACGACCGTGGATATCTGATTAGCGAAG
GTGCATTAAAGATCAAAGTGAGTTATCCCGCACTGCCTTGGATGGGCGTGATTTTACTGGGGTATGTCGCTGGGCCTATT
TTCAGTCAGAAACCGAATGCTAACTCGCTTGAAGCCTCGCAGCGCCAGCAAACACTGCTGAGATTAGGGATAAGCTGCTG
GGTACTTTTTGCGTTGCTGCGCGGGTTTAACATCTATGGCGAAACCTTGCCTTGGCAGTCGGGGGCACATTTGGGTGAAA
CCTTAATGTCGGTACTCAACTTAACCAAATACCCGCCATCATTAAGTTTTTTACTGGTGACCTTAGGCGGCATGTTCTTT
TGCCTAGTGGCCTTTGAGCGGTATTTTGCATCAAGTGGGAAAGTAGAGGGGAGATTAGCGCGAGTCGGCCATGGGTTGTC
TGTGCTTGGCTCAGTCCCTATGTTCTTCTATATCCTACATTTGTACGTGTTGTTACTGCTTTATAGCTTAGCAAAATTCA
CCTTTGGCGCTAACCACGGTGAGTTATTTGGGGTGAATAGTATGGGATGGATTTGGTTCATCGCGGGCGTGTTAGCTATC
GCGCTGTATTATCCCGTTAAGCGGTTTAGCGAGTATAAAAAACACAGCACTCAGGCTTGGATTAAGTACCTCTAA

Upstream 100 bases:

>100_bases
AATCTGGACAACTTATTGGATGAGCACTATATCGCCAGCAGTTATTCGGCACTTTGGGCGGTACCCGGTGAGCCACGTAG
CATTAAAGTGAGTGTCAGCT

Downstream 100 bases:

>100_bases
ATTTAAGTGCTTCTAAATCTAAGCGCCTCTAAATCTAAGCACTTCTAAACTTGAGTCATGTCGCTTTAAAGAAAAAGTCG
CCAAGCGTAACCGCTTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSWGL
FLSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLT
LAALINLPRSWMAVLGLAIVFGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPI
FSQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLNLTKYPPSLSFLLVTLGGMFF
CLVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILHLYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAI
ALYYPVKRFSEYKKHSTQAWIKYL

Sequences:

>Translated_424_residues
MSSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSWGL
FLSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLT
LAALINLPRSWMAVLGLAIVFGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPI
FSQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLNLTKYPPSLSFLLVTLGGMFF
CLVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILHLYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAI
ALYYPVKRFSEYKKHSTQAWIKYL
>Mature_423_residues
SSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSWGLF
LSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLTL
AALINLPRSWMAVLGLAIVFGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPIF
SQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLNLTKYPPSLSFLLVTLGGMFFC
LVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILHLYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAIA
LYYPVKRFSEYKKHSTQAWIKYL

Specific function: Unknown

COG id: COG3503

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47801; Mature: 47670

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRER
CCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLHMQVSDPMDLSSTSWGLFLSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFL
HEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLTLAALINLPRSWMAVLGLAIV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPI
HHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCC
FSQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LTKYPPSLSFLLVTLGGMFFCLVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILH
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH
LYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAIALYYPVKRFSEYKKHSTQAW
HHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKYL
HHCC
>Mature Secondary Structure 
SSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRER
CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLHMQVSDPMDLSSTSWGLFLSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFL
HEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLTLAALINLPRSWMAVLGLAIV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPI
HHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCC
FSQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LTKYPPSLSFLLVTLGGMFFCLVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILH
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH
LYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAIALYYPVKRFSEYKKHSTQAW
HHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKYL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA