| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876570
Identifier: 160876570
GI number: 160876570
Start: 4082545
End: 4083819
Strand: Reverse
Name: 160876570
Synonym: Sbal195_3464
Alternate gene names: NA
Gene position: 4083819-4082545 (Counterclockwise)
Preceding gene: 160876571
Following gene: 160876568
Centisome position: 76.37
GC content: 47.76
Gene sequence:
>1275_bases ATGAGTTCTAACATTAGCCGTTCTAATATCTGCTCGAATATAAACACTCGTCCTGAGTTACCGTCAGGTTTTGCCGAGCA AGAACTGAGTCGCTCTATTGGCCGTAGCCGTATCAATAGTATCGATATGATGCGCGGCCTGGTGATGCTCATCATGCTGC TCGACCATGTGCGGGAACGGTTTTTCCTGCATATGCAGGTGAGCGACCCCATGGATTTGAGTTCGACCTCTTGGGGACTG TTTCTAAGCCGCTTTGCCGCGCATTTTTGTGCGCCAGTGTTTGTGTTTCTAACGGGCATTTCTGCTTGGCTTTATGCCAA TCGCAGTCATGGACAGCCGCGTTCAGCGCGGGCGTTTTTGATTAAACGTGGCTTATTTTTAATCGCGCTCGAAATCTTAG TGATTAACATCTCTTGGATGGGCAACTACCATACGCTTTGGCTGCAGGTCATTTGGGTGATCGGCCTGAGCATGTTAACG CTGGCGGCACTGATAAATCTGCCTAGATCTTGGATGGCTGTTTTAGGGTTAGCGATTGTCTTTGGTCATAATCTGTTGAC GCCAATTCATTTTCAGCCGAGTGAATGGGCTTACGGTTTGTGGACCATATTGCACGACCGTGGATATCTGATTAGCGAAG GTGCATTAAAGATCAAAGTGAGTTATCCCGCACTGCCTTGGATGGGCGTGATTTTACTGGGGTATGTCGCTGGGCCTATT TTCAGTCAGAAACCGAATGCTAACTCGCTTGAAGCCTCGCAGCGCCAGCAAACACTGCTGAGATTAGGGATAAGCTGCTG GGTACTTTTTGCGTTGCTGCGCGGGTTTAACATCTATGGCGAAACCTTGCCTTGGCAGTCGGGGGCACATTTGGGTGAAA CCTTAATGTCGGTACTCAACTTAACCAAATACCCGCCATCATTAAGTTTTTTACTGGTGACCTTAGGCGGCATGTTCTTT TGCCTAGTGGCCTTTGAGCGGTATTTTGCATCAAGTGGGAAAGTAGAGGGGAGATTAGCGCGAGTCGGCCATGGGTTGTC TGTGCTTGGCTCAGTCCCTATGTTCTTCTATATCCTACATTTGTACGTGTTGTTACTGCTTTATAGCTTAGCAAAATTCA CCTTTGGCGCTAACCACGGTGAGTTATTTGGGGTGAATAGTATGGGATGGATTTGGTTCATCGCGGGCGTGTTAGCTATC GCGCTGTATTATCCCGTTAAGCGGTTTAGCGAGTATAAAAAACACAGCACTCAGGCTTGGATTAAGTACCTCTAA
Upstream 100 bases:
>100_bases AATCTGGACAACTTATTGGATGAGCACTATATCGCCAGCAGTTATTCGGCACTTTGGGCGGTACCCGGTGAGCCACGTAG CATTAAAGTGAGTGTCAGCT
Downstream 100 bases:
>100_bases ATTTAAGTGCTTCTAAATCTAAGCGCCTCTAAATCTAAGCACTTCTAAACTTGAGTCATGTCGCTTTAAAGAAAAAGTCG CCAAGCGTAACCGCTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSWGL FLSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLT LAALINLPRSWMAVLGLAIVFGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPI FSQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLNLTKYPPSLSFLLVTLGGMFF CLVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILHLYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAI ALYYPVKRFSEYKKHSTQAWIKYL
Sequences:
>Translated_424_residues MSSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSWGL FLSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLT LAALINLPRSWMAVLGLAIVFGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPI FSQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLNLTKYPPSLSFLLVTLGGMFF CLVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILHLYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAI ALYYPVKRFSEYKKHSTQAWIKYL >Mature_423_residues SSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRERFFLHMQVSDPMDLSSTSWGLF LSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFLIKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLTL AALINLPRSWMAVLGLAIVFGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPIF SQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLNLTKYPPSLSFLLVTLGGMFFC LVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILHLYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAIA LYYPVKRFSEYKKHSTQAWIKYL
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47801; Mature: 47670
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRER CCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLHMQVSDPMDLSSTSWGLFLSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFL HEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH IKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLTLAALINLPRSWMAVLGLAIV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPI HHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCC FSQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH LTKYPPSLSFLLVTLGGMFFCLVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILH HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH LYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAIALYYPVKRFSEYKKHSTQAW HHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKYL HHCC >Mature Secondary Structure SSNISRSNICSNINTRPELPSGFAEQELSRSIGRSRINSIDMMRGLVMLIMLLDHVRER CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLHMQVSDPMDLSSTSWGLFLSRFAAHFCAPVFVFLTGISAWLYANRSHGQPRSARAFL HEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH IKRGLFLIALEILVINISWMGNYHTLWLQVIWVIGLSMLTLAALINLPRSWMAVLGLAIV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FGHNLLTPIHFQPSEWAYGLWTILHDRGYLISEGALKIKVSYPALPWMGVILLGYVAGPI HHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCC FSQKPNANSLEASQRQQTLLRLGISCWVLFALLRGFNIYGETLPWQSGAHLGETLMSVLN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH LTKYPPSLSFLLVTLGGMFFCLVAFERYFASSGKVEGRLARVGHGLSVLGSVPMFFYILH HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH LYVLLLLYSLAKFTFGANHGELFGVNSMGWIWFIAGVLAIALYYPVKRFSEYKKHSTQAW HHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKYL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA