| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876465
Identifier: 160876465
GI number: 160876465
Start: 3965874
End: 3968255
Strand: Direct
Name: 160876465
Synonym: Sbal195_3359
Alternate gene names: NA
Gene position: 3965874-3968255 (Clockwise)
Preceding gene: 160876463
Following gene: 160876468
Centisome position: 74.17
GC content: 45.34
Gene sequence:
>2382_bases ATGAGTTTAGATAACCATAGTGCACTCATCGAACAGCTCAAGCCGTTACTCATGGAACCTAACTTCCAAGAGATTTTCCA GCAGCTGACGATAGATGAAACCAATTCGACCCGTTTTCTTGTGAAAATGGAATTGAGTCGTTTGGCTTCGCCTTGCACTC GAATTATCGATCTCAGGGATAAATCTGAGCTTACTTGTACTGAAGTCATGTTAGGCCAACAGCGACATTTTTTAGACGAG CCCGCTAAAAACAGTATGCATGAGGCCATGTCACTGTTTCGCAACCAATATACCTTAGGTGTGTATGAGTATGTGCTCAA TGCTCACCAACAGCGTCGGGTAAAATTACGTCAAGGTGTGACTCAAGTTGAAGCCGCCGAACCTGAACCTTTTATGGTGC CCGGCGTGGTATTAGGCAGCTATTTCAACCGTGCCGAAGAACGGATGAATTACAGTATTCGCATTGCGGCATCACAAACG GGTCGCGGTGAAGTGCCAGGGATCACGGCAGATTTATCTATCGGCGGCGCCCGTATTCGTCTTGCAGCCAATCATCCCTT CGATCTCGACCAACCACTCAAAGTTAAGTTACTGGAACTCAGCGAAGAGTTTTACTATCCCGATCTCCAGCTAGGAGTGG ATTATCAGATTGTCGATAGCCAAACCAATGGCGAATATATTTGGCTAAGACTCAAACGCCTTGGTGGCAGCGAAGCCTTA AGTGAAATGCTCGGCAATTTAATCCGCGGCTATAAACTGCGTTACAAGGTAGATGTCAATGATGTGATTGTGAGTGCAAC AGGACTCGGATTTGAACGCCATTATTTACCCCACCTGCCTCACTTACCTTTGTATTTCAATACTCAAACCCAAGGTTTGA GTCACATGCTACTCAGCCGTGACAACCAACAGATAGTGCATTATTTTCAAGATGAGAATGATGTCAGCCAATTACCAGCC ATGCTGACCCCAAGCCGAGTATCGGCATTGCTGAGTCATCCAGAAAATCCCGACCACGGGCTATTTTTTAGCTTTACCTA TAATGCCCAAGGCTGCTTATATTTTTACTCTGCCACCTTAGCGGAGCTTAAAGCTAAGGGCATGATGCCTTTATTCCTAG GCTTTGCATCGACCAAACCTAGCTGGCGGATCTTTAAAGTAACCCAAGATAAAATTTATCATGATAAGGGCTATCGCCGC GCAACCCTGCCGGGCGATGAGGCTAAATTCAGCCCACTGGTTGAACAGCAGTTATCGCAGTTTAGTCATTTACTGCAGCT CATCGATATCAGTAATGAAGATGCCAGAGGGCATTACAAAGCCTGGCAAGACAACAGTAATGCCAATGCCCTTAAAACCT TTGGTCAACAACGATTAACCACCAATCAAATTAAGTTAGTTTCCATGCAATTTAGCGAGCGACGCCAAGAGGCTCGTTTC GCCTTTAAAACCTTAGTCAACGTGACGCAAGACAAGCTAAAAGCCACGGGCATTACTTTAGATATTTCTAGCCGCGGCAT GCAATTAACCTTAGACAACCCGACAGATTTCTCATCGAATAAACCGCTACTGCTAAGCTTTCCCAAACTACAAACCATTG CGGGCAAAACACAGCTAGATAACCTCCCCTACCGTTTAGTGCGCACCCGCAAGAATGGCGTGACGCTGCATTTAACCGCA GTCATGGGCCATACCCCCCATGTGGGGGTGGAGTTTTTAAATAAACTCATTGCCCATAATAAGGAAAAGCTAGAACAACT GACCGAGAACAATAGTGAGGCTAATGAACTTGCCGATGGTTTAAAAAACATTTTAATGCATGATCTGCATTCTGTGCCCT ACTTTGTTGAAAAAACGACAAAATCGGCCCAAGTCGCGTGTTTAGGCGTCGGTACGCGACAAGATGAGATCAGCGATATT TTTGCTGCGGGCACCTCAGATACCCTGCAATATAATTTAGCGCCGCTGCTAAAAGACGGTTTCTTTAAACGGGATATTCT CGAACCTATTCGCCAGATGAAACCCCAGCAAGATATGGATTTTATTGAAGTGTTTGTTCAATTGATCCGTCAATCACGTG GCAAAATCTTTTTAAAGTGTACTCCCGCCACGGAAGTCGGTGAAGTTGACGCTCAGATAACCTTTATCAATCAGAGCAAA GCAGTAGGCCGATTCCTCGCCCTACGCATTTACCGTGGCGCAACAGAGAAGCCAGATATGAGTTACCTGCGCCGCGAGTT GGAATACATTAATATTCATGCAAACCATAAAGCCAAACAGTTAGAAGAACAACTATGGCGAGTGATTGGCGTCGGTGAAC TCTTGGATATCACCCAAGAGGTTGAATTAAGATACCCAGTACTCCACAAGAAACAGTCTTAA
Upstream 100 bases:
>100_bases ATTCTGTCATTGATGCGCCTTGAATTGAACCACCCTATGCGCTCTGAAACTCGTATCTTCAGGTAGCTTGGGTATTAATA AGCATTAAAAAGAACCCTAC
Downstream 100 bases:
>100_bases CCATTTAACACCGCCAAATCAAAACTTAAATACCAATCACTAATTTTGGGGAAATGATCGCTGGTGGCATCTAAATGCGT CAGCATATCGGCATGACCAT
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly TapZ
Number of amino acids: Translated: 793; Mature: 792
Protein sequence:
>793_residues MSLDNHSALIEQLKPLLMEPNFQEIFQQLTIDETNSTRFLVKMELSRLASPCTRIIDLRDKSELTCTEVMLGQQRHFLDE PAKNSMHEAMSLFRNQYTLGVYEYVLNAHQQRRVKLRQGVTQVEAAEPEPFMVPGVVLGSYFNRAEERMNYSIRIAASQT GRGEVPGITADLSIGGARIRLAANHPFDLDQPLKVKLLELSEEFYYPDLQLGVDYQIVDSQTNGEYIWLRLKRLGGSEAL SEMLGNLIRGYKLRYKVDVNDVIVSATGLGFERHYLPHLPHLPLYFNTQTQGLSHMLLSRDNQQIVHYFQDENDVSQLPA MLTPSRVSALLSHPENPDHGLFFSFTYNAQGCLYFYSATLAELKAKGMMPLFLGFASTKPSWRIFKVTQDKIYHDKGYRR ATLPGDEAKFSPLVEQQLSQFSHLLQLIDISNEDARGHYKAWQDNSNANALKTFGQQRLTTNQIKLVSMQFSERRQEARF AFKTLVNVTQDKLKATGITLDISSRGMQLTLDNPTDFSSNKPLLLSFPKLQTIAGKTQLDNLPYRLVRTRKNGVTLHLTA VMGHTPHVGVEFLNKLIAHNKEKLEQLTENNSEANELADGLKNILMHDLHSVPYFVEKTTKSAQVACLGVGTRQDEISDI FAAGTSDTLQYNLAPLLKDGFFKRDILEPIRQMKPQQDMDFIEVFVQLIRQSRGKIFLKCTPATEVGEVDAQITFINQSK AVGRFLALRIYRGATEKPDMSYLRRELEYINIHANHKAKQLEEQLWRVIGVGELLDITQEVELRYPVLHKKQS
Sequences:
>Translated_793_residues MSLDNHSALIEQLKPLLMEPNFQEIFQQLTIDETNSTRFLVKMELSRLASPCTRIIDLRDKSELTCTEVMLGQQRHFLDE PAKNSMHEAMSLFRNQYTLGVYEYVLNAHQQRRVKLRQGVTQVEAAEPEPFMVPGVVLGSYFNRAEERMNYSIRIAASQT GRGEVPGITADLSIGGARIRLAANHPFDLDQPLKVKLLELSEEFYYPDLQLGVDYQIVDSQTNGEYIWLRLKRLGGSEAL SEMLGNLIRGYKLRYKVDVNDVIVSATGLGFERHYLPHLPHLPLYFNTQTQGLSHMLLSRDNQQIVHYFQDENDVSQLPA MLTPSRVSALLSHPENPDHGLFFSFTYNAQGCLYFYSATLAELKAKGMMPLFLGFASTKPSWRIFKVTQDKIYHDKGYRR ATLPGDEAKFSPLVEQQLSQFSHLLQLIDISNEDARGHYKAWQDNSNANALKTFGQQRLTTNQIKLVSMQFSERRQEARF AFKTLVNVTQDKLKATGITLDISSRGMQLTLDNPTDFSSNKPLLLSFPKLQTIAGKTQLDNLPYRLVRTRKNGVTLHLTA VMGHTPHVGVEFLNKLIAHNKEKLEQLTENNSEANELADGLKNILMHDLHSVPYFVEKTTKSAQVACLGVGTRQDEISDI FAAGTSDTLQYNLAPLLKDGFFKRDILEPIRQMKPQQDMDFIEVFVQLIRQSRGKIFLKCTPATEVGEVDAQITFINQSK AVGRFLALRIYRGATEKPDMSYLRRELEYINIHANHKAKQLEEQLWRVIGVGELLDITQEVELRYPVLHKKQS >Mature_792_residues SLDNHSALIEQLKPLLMEPNFQEIFQQLTIDETNSTRFLVKMELSRLASPCTRIIDLRDKSELTCTEVMLGQQRHFLDEP AKNSMHEAMSLFRNQYTLGVYEYVLNAHQQRRVKLRQGVTQVEAAEPEPFMVPGVVLGSYFNRAEERMNYSIRIAASQTG RGEVPGITADLSIGGARIRLAANHPFDLDQPLKVKLLELSEEFYYPDLQLGVDYQIVDSQTNGEYIWLRLKRLGGSEALS EMLGNLIRGYKLRYKVDVNDVIVSATGLGFERHYLPHLPHLPLYFNTQTQGLSHMLLSRDNQQIVHYFQDENDVSQLPAM LTPSRVSALLSHPENPDHGLFFSFTYNAQGCLYFYSATLAELKAKGMMPLFLGFASTKPSWRIFKVTQDKIYHDKGYRRA TLPGDEAKFSPLVEQQLSQFSHLLQLIDISNEDARGHYKAWQDNSNANALKTFGQQRLTTNQIKLVSMQFSERRQEARFA FKTLVNVTQDKLKATGITLDISSRGMQLTLDNPTDFSSNKPLLLSFPKLQTIAGKTQLDNLPYRLVRTRKNGVTLHLTAV MGHTPHVGVEFLNKLIAHNKEKLEQLTENNSEANELADGLKNILMHDLHSVPYFVEKTTKSAQVACLGVGTRQDEISDIF AAGTSDTLQYNLAPLLKDGFFKRDILEPIRQMKPQQDMDFIEVFVQLIRQSRGKIFLKCTPATEVGEVDAQITFINQSKA VGRFLALRIYRGATEKPDMSYLRRELEYINIHANHKAKQLEEQLWRVIGVGELLDITQEVELRYPVLHKKQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90402; Mature: 90271
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDNHSALIEQLKPLLMEPNFQEIFQQLTIDETNSTRFLVKMELSRLASPCTRIIDLRD CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCC KSELTCTEVMLGQQRHFLDEPAKNSMHEAMSLFRNQYTLGVYEYVLNAHQQRRVKLRQGV CCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC TQVEAAEPEPFMVPGVVLGSYFNRAEERMNYSIRIAASQTGRGEVPGITADLSIGGARIR HHHHCCCCCCEEECHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEECCCEEEE LAANHPFDLDQPLKVKLLELSEEFYYPDLQLGVDYQIVDSQTNGEYIWLRLKRLGGSEAL EEECCCCCCCCCCHHHHEEHHHHHCCCCEEECCEEEEEECCCCCCEEEEEEECCCCHHHH SEMLGNLIRGYKLRYKVDVNDVIVSATGLGFERHYLPHLPHLPLYFNTQTQGLSHMLLSR HHHHHHHHCCEEEEEEEEHHHEEEEECCCCCHHCCCCCCCCCCEEECCCCCCHHHHHHCC DNQQIVHYFQDENDVSQLPAMLTPSRVSALLSHPENPDHGLFFSFTYNAQGCLYFYSATL CCHHHHHEECCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEHHHHHH AELKAKGMMPLFLGFASTKPSWRIFKVTQDKIYHDKGYRRATLPGDEAKFSPLVEQQLSQ HHHHHCCCCCEEEEECCCCCCEEEEEEEHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHH FSHLLQLIDISNEDARGHYKAWQDNSNANALKTFGQQRLTTNQIKLVSMQFSERRQEARF HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH AFKTLVNVTQDKLKATGITLDISSRGMQLTLDNPTDFSSNKPLLLSFPKLQTIAGKTQLD HHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCCHHHHCCCCCCC NLPYRLVRTRKNGVTLHLTAVMGHTPHVGVEFLNKLIAHNKEKLEQLTENNSEANELADG CCCHHHHEECCCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH LKNILMHDLHSVPYFVEKTTKSAQVACLGVGTRQDEISDIFAAGTSDTLQYNLAPLLKDG HHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEECCHHHHHCC FFKRDILEPIRQMKPQQDMDFIEVFVQLIRQSRGKIFLKCTPATEVGEVDAQITFINQSK CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCH AVGRFLALRIYRGATEKPDMSYLRRELEYINIHANHKAKQLEEQLWRVIGVGELLDITQE HHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHH VELRYPVLHKKQS HHCCCCCCCCCCC >Mature Secondary Structure SLDNHSALIEQLKPLLMEPNFQEIFQQLTIDETNSTRFLVKMELSRLASPCTRIIDLRD CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCC KSELTCTEVMLGQQRHFLDEPAKNSMHEAMSLFRNQYTLGVYEYVLNAHQQRRVKLRQGV CCCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC TQVEAAEPEPFMVPGVVLGSYFNRAEERMNYSIRIAASQTGRGEVPGITADLSIGGARIR HHHHCCCCCCEEECHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEECCCEEEE LAANHPFDLDQPLKVKLLELSEEFYYPDLQLGVDYQIVDSQTNGEYIWLRLKRLGGSEAL EEECCCCCCCCCCHHHHEEHHHHHCCCCEEECCEEEEEECCCCCCEEEEEEECCCCHHHH SEMLGNLIRGYKLRYKVDVNDVIVSATGLGFERHYLPHLPHLPLYFNTQTQGLSHMLLSR HHHHHHHHCCEEEEEEEEHHHEEEEECCCCCHHCCCCCCCCCCEEECCCCCCHHHHHHCC DNQQIVHYFQDENDVSQLPAMLTPSRVSALLSHPENPDHGLFFSFTYNAQGCLYFYSATL CCHHHHHEECCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEHHHHHH AELKAKGMMPLFLGFASTKPSWRIFKVTQDKIYHDKGYRRATLPGDEAKFSPLVEQQLSQ HHHHHCCCCCEEEEECCCCCCEEEEEEEHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHH FSHLLQLIDISNEDARGHYKAWQDNSNANALKTFGQQRLTTNQIKLVSMQFSERRQEARF HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHH AFKTLVNVTQDKLKATGITLDISSRGMQLTLDNPTDFSSNKPLLLSFPKLQTIAGKTQLD HHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCCHHHHCCCCCCC NLPYRLVRTRKNGVTLHLTAVMGHTPHVGVEFLNKLIAHNKEKLEQLTENNSEANELADG CCCHHHHEECCCCEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH LKNILMHDLHSVPYFVEKTTKSAQVACLGVGTRQDEISDIFAAGTSDTLQYNLAPLLKDG HHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEECCHHHHHCC FFKRDILEPIRQMKPQQDMDFIEVFVQLIRQSRGKIFLKCTPATEVGEVDAQITFINQSK CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCH AVGRFLALRIYRGATEKPDMSYLRRELEYINIHANHKAKQLEEQLWRVIGVGELLDITQE HHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHH VELRYPVLHKKQS HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA