| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876463
Identifier: 160876463
GI number: 160876463
Start: 3963604
End: 3963975
Strand: Direct
Name: 160876463
Synonym: Sbal195_3357
Alternate gene names: NA
Gene position: 3963604-3963975 (Clockwise)
Preceding gene: 160876461
Following gene: 160876465
Centisome position: 74.12
GC content: 43.82
Gene sequence:
>372_bases ATGGACGAAAGGCGCAAGTTTTCGCGGATTCTATTTGCCACTAATGCACATCTACAACAAGGTGTTGCACAGTGGGAGAC GACCATTCTCGATTTGAGTCTAAATGGCGCTTTGGTCGAAGAGCCGCAAAATTTTATCCACTCGGGTGATGCAATTACCC TCAGTTTTATCTTGCCCGAATCTGACATTGAGATCCGTATGGAAACTGAGTTGGTCCATCAAAAAAATGCCCAATTAGGC TTGAAGTGTAACTTCATCGACGTCGACAGCATCAGCCACCTAAAACGTATGGTGGAGCTGAACTTAGGTGATGCTTCCTT GCTGAATCGCGAACTTATGTTGTTTATCGAAAAACACAATATCGCAGATTAA
Upstream 100 bases:
>100_bases CAAAAAATTGCTCTGCTTTTACAGTCACATCAATATGACATATGCTTAGGGACACTGATGGGACTACACTTAGCTGACTA TGAAAGAAAAAGGATTGGGT
Downstream 100 bases:
>100_bases GACACTCGCTCACAAACACAAACAGCGCCTAATGGCGCTGTTTTGCTTACTGGCGCTCATCTCGCTTGAGAGCGTTTAAT GCTAGCTAGTATCTACATTT
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; Carbamoylphosphate Synthase Large Subunit; Signaling Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MDERRKFSRILFATNAHLQQGVAQWETTILDLSLNGALVEEPQNFIHSGDAITLSFILPESDIEIRMETELVHQKNAQLG LKCNFIDVDSISHLKRMVELNLGDASLLNRELMLFIEKHNIAD
Sequences:
>Translated_123_residues MDERRKFSRILFATNAHLQQGVAQWETTILDLSLNGALVEEPQNFIHSGDAITLSFILPESDIEIRMETELVHQKNAQLG LKCNFIDVDSISHLKRMVELNLGDASLLNRELMLFIEKHNIAD >Mature_123_residues MDERRKFSRILFATNAHLQQGVAQWETTILDLSLNGALVEEPQNFIHSGDAITLSFILPESDIEIRMETELVHQKNAQLG LKCNFIDVDSISHLKRMVELNLGDASLLNRELMLFIEKHNIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14029; Mature: 14029
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDERRKFSRILFATNAHLQQGVAQWETTILDLSLNGALVEEPQNFIHSGDAITLSFILPE CCCHHHHHHHEEECCHHHHHHHHHHHHEEEEEECCCEEECCCHHHHCCCCEEEEEEEECC SDIEIRMETELVHQKNAQLGLKCNFIDVDSISHLKRMVELNLGDASLLNRELMLFIEKHN CCCEEEEHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCHHHHCCEEEEEEECCC IAD CCC >Mature Secondary Structure MDERRKFSRILFATNAHLQQGVAQWETTILDLSLNGALVEEPQNFIHSGDAITLSFILPE CCCHHHHHHHEEECCHHHHHHHHHHHHEEEEEECCCEEECCCHHHHCCCCEEEEEEEECC SDIEIRMETELVHQKNAQLGLKCNFIDVDSISHLKRMVELNLGDASLLNRELMLFIEKHN CCCEEEEHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCHHHHCCEEEEEEECCC IAD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA