| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yfhL [H]
Identifier: 160876443
GI number: 160876443
Start: 3936232
End: 3936483
Strand: Direct
Name: yfhL [H]
Synonym: Sbal195_3337
Alternate gene names: 160876443
Gene position: 3936232-3936483 (Clockwise)
Preceding gene: 160876442
Following gene: 160876444
Centisome position: 73.61
GC content: 50.0
Gene sequence:
>252_bases ATGGCATTACTGATCGACGATAGCTGCATCAACTGCGACATGTGTGAGCCTGAGTGTCCTAATCAGGCCATCACTATGGG CGAAGAGATCTATGAAATCGATCCCGACCGCTGCACCGAATGCGTGGGGCATTACGACAAACCGACTTGCGTGTCTGTCT GCCCAATTGATTGCATCGACCCAGATCCAAACCGCGTCGAATCCAACGACGAGCTGTTAGTGAAATTTGCCGTGTTAACG CAAAAAGCTTAA
Upstream 100 bases:
>100_bases CTGCCCGTGCCGAAAGAGGTCGATTTGAGCCACGGTATTTTGCTGCGTAACCTGCCCCAAGGTCAGGATACGCGCAACCC ACATGAACTAGGTTAAGGTC
Downstream 100 bases:
>100_bases TCACTTAGCCAGACCGAGTGGTTATCTAACCTCTCGGTCAAATCTACCTCATACCCGCCTAAAGCGTTCACAACACTGGC ATATAAACAGTATGCAAAAC
Product: 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDCIDPDPNRVESNDELLVKFAVLT QKA
Sequences:
>Translated_83_residues MALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDCIDPDPNRVESNDELLVKFAVLT QKA >Mature_82_residues ALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDCIDPDPNRVESNDELLVKFAVLTQ KA
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788914, Length=82, Percent_Identity=60.9756097560976, Blast_Score=105, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9241; Mature: 9109
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 14.5 %Cys+Met (Translated Protein) 11.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 13.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDCID CEEEECCCCCCCCCCCCCCCCCEEECCCCEEECCHHHHHHHHCCCCCCCEEEECCCCCCC PDPNRVESNDELLVKFAVLTQKA CCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure ALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPDRCTECVGHYDKPTCVSVCPIDCID EEEECCCCCCCCCCCCCCCCCEEECCCCEEECCHHHHHHHHCCCCCCCEEEECCCCCCC PDPNRVESNDELLVKFAVLTQKA CCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]