| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876429
Identifier: 160876429
GI number: 160876429
Start: 3918113
End: 3918790
Strand: Reverse
Name: 160876429
Synonym: Sbal195_3323
Alternate gene names: NA
Gene position: 3918790-3918113 (Counterclockwise)
Preceding gene: 160876430
Following gene: 160876428
Centisome position: 73.29
GC content: 48.23
Gene sequence:
>678_bases ATGATCTTAAATCGCGCTTTATTTGCTCTAGTTCTGAGTGTTTCTGCCTCTCTGACGCCTCAAGTCATGGCCGCTGAGCT CAATATTAAGCTGGTGGATTTACAGCAGCAGGTGATTGCCGATACTGTCGTGGAGTTGATCCCAGCAGTGATGCCCGATA AGGCTATGCCTGTTGGACATTATGAAATGTCACAAAAAAATCGAACCTTTATCCCTTTTGTGTTGGCGGTCCCTAAGGGC GCCAAGGTGGATTTTCCTAATCTAGATCGCACTCGTCACCATGTGTATTCCTTTTCCGAGGCGAAACCTTTCGAACTTAA ACTGTATGTGGGTCAAGCCGAAGCGCCGATTCAGTTCGATAAACCCGGCTTAGTCGCACTTGGCTGCAATATTCACGATT ATATGCAGGCATTTATCTATGTGGCGGATAGCCCAATTGTTGCGGTGACGGACGAAAAAGGTGAGATCCAGTTTAAGGAT CTTACGGCCGGTCAATATAAAGTCAAACTCTGGCATCCATGGCAGAAGGCGGCCTCCGAGCCGACTGAGCTAATGTTAAC CACTGGCGCGAATCAACTCAGTTTGTCCTTAGACATTGAACGCCAAGCTAAACCGTCAGCCCCGCCGTCGGGATTTGGCC ACTACGATGCTCAAGGCAAGCCATTACATGCTAAATAG
Upstream 100 bases:
>100_bases ATTAGTGATGTACAATGCTACACGAATAAAAATAGTTTGTTTTACGCCGTACTCAGCTAAGGTACTTGTTGACCTTGCAT CACTATGCCCGAGGTAACTG
Downstream 100 bases:
>100_bases TTTTCGCGCACGGCTGATTTTAGTTTTCTTTATTGTGCTGACTCTAGTGCAGTTTGCCACGGCATTTTCCGTATTGACGG CGACCGAAAGGGACAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MILNRALFALVLSVSASLTPQVMAAELNIKLVDLQQQVIADTVVELIPAVMPDKAMPVGHYEMSQKNRTFIPFVLAVPKG AKVDFPNLDRTRHHVYSFSEAKPFELKLYVGQAEAPIQFDKPGLVALGCNIHDYMQAFIYVADSPIVAVTDEKGEIQFKD LTAGQYKVKLWHPWQKAASEPTELMLTTGANQLSLSLDIERQAKPSAPPSGFGHYDAQGKPLHAK
Sequences:
>Translated_225_residues MILNRALFALVLSVSASLTPQVMAAELNIKLVDLQQQVIADTVVELIPAVMPDKAMPVGHYEMSQKNRTFIPFVLAVPKG AKVDFPNLDRTRHHVYSFSEAKPFELKLYVGQAEAPIQFDKPGLVALGCNIHDYMQAFIYVADSPIVAVTDEKGEIQFKD LTAGQYKVKLWHPWQKAASEPTELMLTTGANQLSLSLDIERQAKPSAPPSGFGHYDAQGKPLHAK >Mature_225_residues MILNRALFALVLSVSASLTPQVMAAELNIKLVDLQQQVIADTVVELIPAVMPDKAMPVGHYEMSQKNRTFIPFVLAVPKG AKVDFPNLDRTRHHVYSFSEAKPFELKLYVGQAEAPIQFDKPGLVALGCNIHDYMQAFIYVADSPIVAVTDEKGEIQFKD LTAGQYKVKLWHPWQKAASEPTELMLTTGANQLSLSLDIERQAKPSAPPSGFGHYDAQGKPLHAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24839; Mature: 24839
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILNRALFALVLSVSASLTPQVMAAELNIKLVDLQQQVIADTVVELIPAVMPDKAMPVGH CCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCC YEMSQKNRTFIPFVLAVPKGAKVDFPNLDRTRHHVYSFSEAKPFELKLYVGQAEAPIQFD EECCCCCCEEEEEEEECCCCCEECCCCCCCCHHHEEECCCCCCEEEEEEECCCCCCEEEC KPGLVALGCNIHDYMQAFIYVADSPIVAVTDEKGEIQFKDLTAGQYKVKLWHPWQKAASE CCCEEEEECCHHHHHHEEEEECCCCEEEEECCCCCEEEEEECCCEEEEEEECCHHHHHCC PTELMLTTGANQLSLSLDIERQAKPSAPPSGFGHYDAQGKPLHAK CCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MILNRALFALVLSVSASLTPQVMAAELNIKLVDLQQQVIADTVVELIPAVMPDKAMPVGH CCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCC YEMSQKNRTFIPFVLAVPKGAKVDFPNLDRTRHHVYSFSEAKPFELKLYVGQAEAPIQFD EECCCCCCEEEEEEEECCCCCEECCCCCCCCHHHEEECCCCCCEEEEEEECCCCCCEEEC KPGLVALGCNIHDYMQAFIYVADSPIVAVTDEKGEIQFKDLTAGQYKVKLWHPWQKAASE CCCEEEEECCHHHHHHEEEEECCCCEEEEECCCCCEEEEEECCCEEEEEEECCHHHHHCC PTELMLTTGANQLSLSLDIERQAKPSAPPSGFGHYDAQGKPLHAK CCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA