| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876415
Identifier: 160876415
GI number: 160876415
Start: 3901155
End: 3901847
Strand: Direct
Name: 160876415
Synonym: Sbal195_3309
Alternate gene names: NA
Gene position: 3901155-3901847 (Clockwise)
Preceding gene: 160876414
Following gene: 160876416
Centisome position: 72.96
GC content: 53.25
Gene sequence:
>693_bases ATGACTACCCCAACAACTCCTTCTGCTAGCACGGCCAACAACACACCAGCGGCCAAAGTGCGTACTCTGCACGCGATTAT CGACCCTTTATGTGGTTGGTGTTATGCCGCAGCGCCGTTACTCGATGCTGCAGCCAAAGCTGGCTTTACCATTAAGCTCC ACGGCGGCGGTATGCTCACAGGCCCAAGACGCAAACAAATCGATGCCAACTGGCGCGACTATGTTATGCCCCACGATCTG CGCATTGCCGAGCTAACCGGACAGCCTTTTGGTGAGAACTATTTCGATGGTCTGCTGCGCGATACCACAGTCGTACTCGA CTCGGCGCCCCCCATTAAAGCCATGCTCGCAGTCGATGCGATGGGCGGCGACAGTTTGGCCTATCTGCACTCAGTACAAC TGGCCCATTACCGCGATGGTCACAGCGCCAGTGATGAAGGCAATATCGCAAGGTTAGCCGCTGAACTTGGGCTCGACCCT ATAGGCTTTGCGCAGCATTATGCTCAAGGTGAAGACAAGCTGTATGAGCATATCGTTGAGTCCAGAGCATTATTGAATCT GATAGGTGCCCAAGGCTTCCCTTCTATGGCTATAGAGGATAATGACGGCAACATCACCGCCATTAATATCAACCGCTTCT ACGGCCAACCCGCCCAGTGGTTAAGCCATCTTGAAGCGCAATTCGAGTCATAA
Upstream 100 bases:
>100_bases GCACCCAAATAACGGTACCAAACTAACGATTTTAATCGATGATATCAAAGGGCTTAAGTCGCTAATGTAGCGACGAACTT AAGCCAAAAGGTTTAACACT
Downstream 100 bases:
>100_bases TCATGCCAATGCTTAATGGTATTTCAGAAGGCTCATTAGTGAGTGAGCCTGCTCAGTTAAGTCTTATCAAAACAGCAAGG CAGACTGATGCGAATCTTGC
Product: putative protein-disulfide isomerase
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Thioredoxin Domain-Containing Protein DsbA Family
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTTPTTPSASTANNTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLTGPRRKQIDANWRDYVMPHDL RIAELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDAMGGDSLAYLHSVQLAHYRDGHSASDEGNIARLAAELGLDP IGFAQHYAQGEDKLYEHIVESRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES
Sequences:
>Translated_230_residues MTTPTTPSASTANNTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLTGPRRKQIDANWRDYVMPHDL RIAELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDAMGGDSLAYLHSVQLAHYRDGHSASDEGNIARLAAELGLDP IGFAQHYAQGEDKLYEHIVESRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES >Mature_229_residues TTPTTPSASTANNTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLTGPRRKQIDANWRDYVMPHDLR IAELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDAMGGDSLAYLHSVQLAHYRDGHSASDEGNIARLAAELGLDPI GFAQHYAQGEDKLYEHIVESRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24842; Mature: 24711
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTTPSASTANNTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEC GPRRKQIDANWRDYVMPHDLRIAELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDA CCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEC MGGDSLAYLHSVQLAHYRDGHSASDEGNIARLAAELGLDPIGFAQHYAQGEDKLYEHIVE CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHH SRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES HHHHHHHHCCCCCCCEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure TTPTTPSASTANNTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEC GPRRKQIDANWRDYVMPHDLRIAELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDA CCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEC MGGDSLAYLHSVQLAHYRDGHSASDEGNIARLAAELGLDPIGFAQHYAQGEDKLYEHIVE CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHH SRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES HHHHHHHHCCCCCCCEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA