| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876414
Identifier: 160876414
GI number: 160876414
Start: 3900011
End: 3900934
Strand: Direct
Name: 160876414
Synonym: Sbal195_3308
Alternate gene names: NA
Gene position: 3900011-3900934 (Clockwise)
Preceding gene: 160876412
Following gene: 160876415
Centisome position: 72.93
GC content: 47.19
Gene sequence:
>924_bases ATGAACACATCGACCTATGCTATATGCAACACAGTTAACGCCACATTGAAGGCCTCGTCTAAAATCAGCCTAGCCGCTAC CTTACTGCTAGCGGGACTCGGCGCGGTCAATGCGGCACCATTGCAAGTGAGCCATTTTAATCCGGGCGAAAACAGCATCT TTGCCGTGTCATCGAGCTTTATCAGCGGCGAACACGAAATGATGTTAGTCGATGCACAATTTCAAAATAACGATGCCCAA ACCTTGGTTGATACCATCAAGGCCAGCGGTAAAAAACTGACTCAGGTGTATATCAGTCATAGCGATCCTGACTTTTATTT CGGTTTAGCCGTGATTAAAAAGAATTTCCCCGATGCACAAATCGTTGCGACTCAAACCACAGTCGATGCCATTAAAGCCT CAATGGAAGGTAAGCTTGCCTACTGGGGGCCAATCTTAAAGGACAATGCGCCAAGTGAATTAGTGCTACCTAAGGCGATT CACAGCGACACTTTCACCATCGACGGTGAGCAAGTGATTATCGAAGGTTTCAATGATAAACACCCTAAACACACTTTCCT GTGGGTGCCATCGGCAAAAACCATTACAGGTGGCGTAGAAGTATTTGATAACACGCATGTTTGGATGGCTGACACTCAAA CTGCCGCAGAGCGTCAGGAATGGTTAACTCATTTAGATGCGATGGAAAAACTGCTGCCGACCACAGTCATCCCAGGGCAC TATTTAGGCGAAGCGCGATTTGATACCCGCGCCATCGGTTTTACCCGTGACTATGTAAAAGCCTTTGAAGTCGCAGCAAA AGCCTCGAAAGATTCAGCCGAATTAATCCAAAAGATGCTAGCGCTATACCCACAAATGCCAGCCGATGCAGGGCTTGAGA TCAGCGCCAAAGTTTACATGGGCGAAATGACCTGGCCTATGTAA
Upstream 100 bases:
>100_bases GCAACCTATACTTAACTCACTTTTTGCAGCAGCTGCAAATCAATGAATGCTAAATCGAACCTTTTTACTCTTTCATCCTG TGACTATAAGTGAGCCAAAA
Downstream 100 bases:
>100_bases GTCCAGCCATACCTATCTCGGCGATGAGGTACAGCTAGTTAGGTGTAAAAGATAGTTAAGTGCAAACAGTTAAAGACAGG CACGTGTTCGATTGCGTGCC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein; Beta-Lactamase; Exported Metallo-Beta-Lactamase Superfamily Protein; Hydrolase
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MNTSTYAICNTVNATLKASSKISLAATLLLAGLGAVNAAPLQVSHFNPGENSIFAVSSSFISGEHEMMLVDAQFQNNDAQ TLVDTIKASGKKLTQVYISHSDPDFYFGLAVIKKNFPDAQIVATQTTVDAIKASMEGKLAYWGPILKDNAPSELVLPKAI HSDTFTIDGEQVIIEGFNDKHPKHTFLWVPSAKTITGGVEVFDNTHVWMADTQTAAERQEWLTHLDAMEKLLPTTVIPGH YLGEARFDTRAIGFTRDYVKAFEVAAKASKDSAELIQKMLALYPQMPADAGLEISAKVYMGEMTWPM
Sequences:
>Translated_307_residues MNTSTYAICNTVNATLKASSKISLAATLLLAGLGAVNAAPLQVSHFNPGENSIFAVSSSFISGEHEMMLVDAQFQNNDAQ TLVDTIKASGKKLTQVYISHSDPDFYFGLAVIKKNFPDAQIVATQTTVDAIKASMEGKLAYWGPILKDNAPSELVLPKAI HSDTFTIDGEQVIIEGFNDKHPKHTFLWVPSAKTITGGVEVFDNTHVWMADTQTAAERQEWLTHLDAMEKLLPTTVIPGH YLGEARFDTRAIGFTRDYVKAFEVAAKASKDSAELIQKMLALYPQMPADAGLEISAKVYMGEMTWPM >Mature_307_residues MNTSTYAICNTVNATLKASSKISLAATLLLAGLGAVNAAPLQVSHFNPGENSIFAVSSSFISGEHEMMLVDAQFQNNDAQ TLVDTIKASGKKLTQVYISHSDPDFYFGLAVIKKNFPDAQIVATQTTVDAIKASMEGKLAYWGPILKDNAPSELVLPKAI HSDTFTIDGEQVIIEGFNDKHPKHTFLWVPSAKTITGGVEVFDNTHVWMADTQTAAERQEWLTHLDAMEKLLPTTVIPGH YLGEARFDTRAIGFTRDYVKAFEVAAKASKDSAELIQKMLALYPQMPADAGLEISAKVYMGEMTWPM
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33519; Mature: 33519
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSTYAICNTVNATLKASSKISLAATLLLAGLGAVNAAPLQVSHFNPGENSIFAVSSSF CCCCEEEEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEHHH ISGEHEMMLVDAQFQNNDAQTLVDTIKASGKKLTQVYISHSDPDFYFGLAVIKKNFPDAQ CCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCE IVATQTTVDAIKASMEGKLAYWGPILKDNAPSELVLPKAIHSDTFTIDGEQVIIEGFNDK EEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCEECCHHHCCCEEEECCCEEEEECCCCC HPKHTFLWVPSAKTITGGVEVFDNTHVWMADTQTAAERQEWLTHLDAMEKLLPTTVIPGH CCCEEEEEECCCCEEECCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC YLGEARFDTRAIGFTRDYVKAFEVAAKASKDSAELIQKMLALYPQMPADAGLEISAKVYM CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEE GEMTWPM ECCCCCC >Mature Secondary Structure MNTSTYAICNTVNATLKASSKISLAATLLLAGLGAVNAAPLQVSHFNPGENSIFAVSSSF CCCCEEEEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEHHH ISGEHEMMLVDAQFQNNDAQTLVDTIKASGKKLTQVYISHSDPDFYFGLAVIKKNFPDAQ CCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCE IVATQTTVDAIKASMEGKLAYWGPILKDNAPSELVLPKAIHSDTFTIDGEQVIIEGFNDK EEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCEECCHHHCCCEEEECCCEEEEECCCCC HPKHTFLWVPSAKTITGGVEVFDNTHVWMADTQTAAERQEWLTHLDAMEKLLPTTVIPGH CCCEEEEEECCCCEEECCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC YLGEARFDTRAIGFTRDYVKAFEVAAKASKDSAELIQKMLALYPQMPADAGLEISAKVYM CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEE GEMTWPM ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA