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The map label for this gene is atoE [H]

Identifier: 160876340

GI number: 160876340

Start: 3801695

End: 3803050

Strand: Reverse

Name: atoE [H]

Synonym: Sbal195_3234

Alternate gene names: 160876340

Gene position: 3803050-3801695 (Counterclockwise)

Preceding gene: 160876342

Following gene: 160876338

Centisome position: 71.12

GC content: 50.29

Gene sequence:

>1356_bases
ATGTTAAACAAAGCGGCAAAACCTTTGGTCAAACTCGTCGACCGATATCTACCCGATCCCTATATTTTCGTCCTTTTACT
CACCTTAGTGGTGTTAATTGCAGCTGTGGTCGCAGAACACAAAAGTCCGCTGGAAGTCATCAATTATTGGGGCGATGGCT
TTTGGACCTTGCTGAGTTTTTCGATGCAGATGCTGTTAGTGCTGGTGGCGGGATTCATGCTGGCAAGCTCACCGCCGATT
AAAAAGTTGCTTGATGCGATTGCGGGGTTAGCTAAATCGGCACCGCAAGCCATTATTTTAGTAACCTTGGTCTCACTGGC
CGCCAGTTGGGTTAACTGGGGATTCGGACTAGTGGTGGGCGCGTTATTTGCCAAAGCCTTAGCGCGTAAAGTGAAAGTGG
ATTATCGGCTGCTGGTCGCCAGCGCCTATTCTGGCTTTGTGGTTTGGCATGGTGGGCTTGCGGGTTCTATCCCGTTAACT
ATAGCAACGGCGGGGCATTTCTCAGAAGCACAAATTGGCATTATCCCCACCAGTGAAACCATTTTCGCTAGCTTTAACTT
ATTGTTAGTGGCGATTCTGTTTGTGGTCATGCCCTTAGTGAATCGCTTTATGTTGCCTGAAGGCAAGGACAGCATTTATG
TCGACCCAAGCGCCCTTGATGACAAAGGCAGCGAACCCGCAGCTTCGGCGCTGGAGCTTAACCCTGCCAATGTGAGCGAG
TGTCAGCTTGAAAGCCGACCTGCGGATAAGTTAGAAAATAGCCGCTTACTCGGCTGGAGTGTCGGTGGCGCTGGGCTTGT
GTACTTAGGCTATTACTTTTGGGTACAGGGCGGCAGCTTAAACCTTAACTTAGTGAACTTCTTATTCTTGTTCCTCGCCA
TCCTCTTACATCAAACGCCACGCAGTTTATTAACCAGCTTGAATGAGGCCATTAAGGGCGGCGCAGGGATTGTGATCCAA
TTCCCTTTCTATGCGGGCATTATGGCGGTGATGGTGCAGTCGGGTTTAGCCCAAAGTATTTCGGAAGGTTTTGTGGCCAT
AGCCAGTGCCGAGAGCCTGCCATTTTGGAGCTTTATCAGTGCGGGAATTGTGAATATTTTTGTGCCATCGGGTGGTGGTC
AGTGGGCCGTGCAGGCGCCGATTATGTTACCCGCTGCCGAAGCCTTGGGCGCCGATGTTGCTCGGGTAGCTATGGCCGTA
GCTTGGGGTGATGCCTGGACTAACCTTATTCAACCTTTCTGGGCATTGCCCGTGCTGGCAATTGCGGGCTTAAAAGCGCG
GGATATTATGGGCTTTTGTTTAATGCAGCTGATGATCACAGGCGTGATTATCAGTATCGCGTTGAGCTGGTTTTAA

Upstream 100 bases:

>100_bases
TCCCGCTTTAGAGATCGCTTAACCTGTGGGCTTAGGACTCAATAAAAATTCAATAAAAACAGATAAAAACTAGAATTTAG
ATAATAAACAAGGAAAGTCT

Downstream 100 bases:

>100_bases
AGATAAAGCGATAGCTGATTCTGTATGTTAGAGAGTAAGAAGGGCAATCTAAGGTTGCCCTTCTTTATTGGCGATTAATG
ATGAATTAAAACCATTTTTG

Product: short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MLNKAAKPLVKLVDRYLPDPYIFVLLLTLVVLIAAVVAEHKSPLEVINYWGDGFWTLLSFSMQMLLVLVAGFMLASSPPI
KKLLDAIAGLAKSAPQAIILVTLVSLAASWVNWGFGLVVGALFAKALARKVKVDYRLLVASAYSGFVVWHGGLAGSIPLT
IATAGHFSEAQIGIIPTSETIFASFNLLLVAILFVVMPLVNRFMLPEGKDSIYVDPSALDDKGSEPAASALELNPANVSE
CQLESRPADKLENSRLLGWSVGGAGLVYLGYYFWVQGGSLNLNLVNFLFLFLAILLHQTPRSLLTSLNEAIKGGAGIVIQ
FPFYAGIMAVMVQSGLAQSISEGFVAIASAESLPFWSFISAGIVNIFVPSGGGQWAVQAPIMLPAAEALGADVARVAMAV
AWGDAWTNLIQPFWALPVLAIAGLKARDIMGFCLMQLMITGVIISIALSWF

Sequences:

>Translated_451_residues
MLNKAAKPLVKLVDRYLPDPYIFVLLLTLVVLIAAVVAEHKSPLEVINYWGDGFWTLLSFSMQMLLVLVAGFMLASSPPI
KKLLDAIAGLAKSAPQAIILVTLVSLAASWVNWGFGLVVGALFAKALARKVKVDYRLLVASAYSGFVVWHGGLAGSIPLT
IATAGHFSEAQIGIIPTSETIFASFNLLLVAILFVVMPLVNRFMLPEGKDSIYVDPSALDDKGSEPAASALELNPANVSE
CQLESRPADKLENSRLLGWSVGGAGLVYLGYYFWVQGGSLNLNLVNFLFLFLAILLHQTPRSLLTSLNEAIKGGAGIVIQ
FPFYAGIMAVMVQSGLAQSISEGFVAIASAESLPFWSFISAGIVNIFVPSGGGQWAVQAPIMLPAAEALGADVARVAMAV
AWGDAWTNLIQPFWALPVLAIAGLKARDIMGFCLMQLMITGVIISIALSWF
>Mature_451_residues
MLNKAAKPLVKLVDRYLPDPYIFVLLLTLVVLIAAVVAEHKSPLEVINYWGDGFWTLLSFSMQMLLVLVAGFMLASSPPI
KKLLDAIAGLAKSAPQAIILVTLVSLAASWVNWGFGLVVGALFAKALARKVKVDYRLLVASAYSGFVVWHGGLAGSIPLT
IATAGHFSEAQIGIIPTSETIFASFNLLLVAILFVVMPLVNRFMLPEGKDSIYVDPSALDDKGSEPAASALELNPANVSE
CQLESRPADKLENSRLLGWSVGGAGLVYLGYYFWVQGGSLNLNLVNFLFLFLAILLHQTPRSLLTSLNEAIKGGAGIVIQ
FPFYAGIMAVMVQSGLAQSISEGFVAIASAESLPFWSFISAGIVNIFVPSGGGQWAVQAPIMLPAAEALGADVARVAMAV
AWGDAWTNLIQPFWALPVLAIAGLKARDIMGFCLMQLMITGVIISIALSWF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=452, Percent_Identity=43.141592920354, Blast_Score=400, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 48171; Mature: 48171

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKAAKPLVKLVDRYLPDPYIFVLLLTLVVLIAAVVAEHKSPLEVINYWGDGFWTLLSF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHH
SMQMLLVLVAGFMLASSPPIKKLLDAIAGLAKSAPQAIILVTLVSLAASWVNWGFGLVVG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALFAKALARKVKVDYRLLVASAYSGFVVWHGGLAGSIPLTIATAGHFSEAQIGIIPTSET
HHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCHH
IFASFNLLLVAILFVVMPLVNRFMLPEGKDSIYVDPSALDDKGSEPAASALELNPANVSE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHEECCCCCCHH
CQLESRPADKLENSRLLGWSVGGAGLVYLGYYFWVQGGSLNLNLVNFLFLFLAILLHQTP
HHCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCH
RSLLTSLNEAIKGGAGIVIQFPFYAGIMAVMVQSGLAQSISEGFVAIASAESLPFWSFIS
HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHH
AGIVNIFVPSGGGQWAVQAPIMLPAAEALGADVARVAMAVAWGDAWTNLIQPFWALPVLA
CCEEEEEEECCCCCEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGLKARDIMGFCLMQLMITGVIISIALSWF
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNKAAKPLVKLVDRYLPDPYIFVLLLTLVVLIAAVVAEHKSPLEVINYWGDGFWTLLSF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHH
SMQMLLVLVAGFMLASSPPIKKLLDAIAGLAKSAPQAIILVTLVSLAASWVNWGFGLVVG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALFAKALARKVKVDYRLLVASAYSGFVVWHGGLAGSIPLTIATAGHFSEAQIGIIPTSET
HHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCHH
IFASFNLLLVAILFVVMPLVNRFMLPEGKDSIYVDPSALDDKGSEPAASALELNPANVSE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHEECCCCCCHH
CQLESRPADKLENSRLLGWSVGGAGLVYLGYYFWVQGGSLNLNLVNFLFLFLAILLHQTP
HHCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCH
RSLLTSLNEAIKGGAGIVIQFPFYAGIMAVMVQSGLAQSISEGFVAIASAESLPFWSFIS
HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHH
AGIVNIFVPSGGGQWAVQAPIMLPAAEALGADVARVAMAVAWGDAWTNLIQPFWALPVLA
CCEEEEEEECCCCCEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGLKARDIMGFCLMQLMITGVIISIALSWF
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]