Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160876339

Identifier: 160876339

GI number: 160876339

Start: 3801130

End: 3801609

Strand: Direct

Name: 160876339

Synonym: Sbal195_3233

Alternate gene names: NA

Gene position: 3801130-3801609 (Clockwise)

Preceding gene: 160876337

Following gene: 160876341

Centisome position: 71.09

GC content: 51.88

Gene sequence:

>480_bases
ATGCAAAGAATCAGTCAGCAGAATCTAAAGATGGCCTTGCTCGCAGGGGGCGGGGCCATGTTGTGTATCAGTAGTTTAGC
CGCGCTTGAACAGCTAACACCGCAAACCATTTGGTTAATGGCTCCCTTTGGCGCCACTATGGTGTTGCTGTTTGCCTTAC
CAGAAAGTCCGCTCGCTCAACCGAGAAACATTTTCTGCGGCCACTTACTCACGAGTCTGGTCGGACTAATAATTTTAAAT
GCTTTGGGAGTCTCCCCGCTCACCTTAGGTCTCGCGGTCGGATTAGGCATAGCGGTCATGATGCTAACCCATACAGTGCA
TCCACCCGCGGGAGCGAATCCTCTGGTCGTTATGCTCACCGCGCAGCACTGGGATTTTCTGTATATGCCCGTCGCCAGTG
GTGTGGCGCTCATTCTGGCTTATGGTTGGCTGTATCACAACTTGCTTTGCCGCCGCCAATACCCGCAAAAATGGTTTTAA

Upstream 100 bases:

>100_bases
ACACCGCAGCGTGTTAACGGCAACGCTTTGCCTGAGCATTCGCGTCCACAGCTCAGTATCAAAATAAGGGCTTAACACCA
GCCATAAATGGGAAGGAAAG

Downstream 100 bases:

>100_bases
TTCATCATTAATCGCCAATAAAGAAGGGCAACCTTAGATTGCCCTTCTTACTCTCTAACATACAGAATCAGCTATCGCTT
TATCTTTAAAACCAGCTCAA

Product: HPP family protein

Products: NA

Alternate protein names: HPP Family Protein+B; CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; CBS-Domain-Containing Membrane Protein; HPP Domain-Containing Protein; HPP Family Membrane Protein; Transmembrane Protein; CBS Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; Cbs Domain Containing Membrane Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQRISQQNLKMALLAGGGAMLCISSLAALEQLTPQTIWLMAPFGATMVLLFALPESPLAQPRNIFCGHLLTSLVGLIILN
ALGVSPLTLGLAVGLGIAVMMLTHTVHPPAGANPLVVMLTAQHWDFLYMPVASGVALILAYGWLYHNLLCRRQYPQKWF

Sequences:

>Translated_159_residues
MQRISQQNLKMALLAGGGAMLCISSLAALEQLTPQTIWLMAPFGATMVLLFALPESPLAQPRNIFCGHLLTSLVGLIILN
ALGVSPLTLGLAVGLGIAVMMLTHTVHPPAGANPLVVMLTAQHWDFLYMPVASGVALILAYGWLYHNLLCRRQYPQKWF
>Mature_159_residues
MQRISQQNLKMALLAGGGAMLCISSLAALEQLTPQTIWLMAPFGATMVLLFALPESPLAQPRNIFCGHLLTSLVGLIILN
ALGVSPLTLGLAVGLGIAVMMLTHTVHPPAGANPLVVMLTAQHWDFLYMPVASGVALILAYGWLYHNLLCRRQYPQKWF

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17218; Mature: 17218

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRISQQNLKMALLAGGGAMLCISSLAALEQLTPQTIWLMAPFGATMVLLFALPESPLAQ
CCCCCHHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCC
PRNIFCGHLLTSLVGLIILNALGVSPLTLGLAVGLGIAVMMLTHTVHPPAGANPLVVMLT
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
AQHWDFLYMPVASGVALILAYGWLYHNLLCRRQYPQKWF
ECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRISQQNLKMALLAGGGAMLCISSLAALEQLTPQTIWLMAPFGATMVLLFALPESPLAQ
CCCCCHHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCC
PRNIFCGHLLTSLVGLIILNALGVSPLTLGLAVGLGIAVMMLTHTVHPPAGANPLVVMLT
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
AQHWDFLYMPVASGVALILAYGWLYHNLLCRRQYPQKWF
ECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA