| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876332
Identifier: 160876332
GI number: 160876332
Start: 3795000
End: 3795500
Strand: Direct
Name: 160876332
Synonym: Sbal195_3226
Alternate gene names: NA
Gene position: 3795000-3795500 (Clockwise)
Preceding gene: 160876330
Following gene: 160876334
Centisome position: 70.97
GC content: 46.11
Gene sequence:
>501_bases ATGAGCCAGACTGACTCTTCTAGCACTGCAGAACAAAAACCAAATAAAGTGCTCGCGCTCTACCATAAGACTCGCCGTTA TCCCTTCGGCCAAAAACTGTTTTCAATCATGGTTTCACGCATGGCGCCCTATTTCGGCACCATCAAACCACTGATCACTG AATTACGCCTTAATCATTGCGCCTGTTTAATTAAAAAACGCCATGCCGTTCATAATCATATAAAAACTGTGCATGTGATT GCGATTTGTAACGGCCTAGAAATGGCCATGGGCGTGATGGCCGAAGCCTCAATTCCAAAGCATTTACGTTGGATCCCTAA GGGCATGAGTTTGGATTATACCGCTAAAGCCGGCAGCGATATTTTGTGTATCGCCGAAGTGACGCCAGAACAATGGACTC CCGGCGATATGTTGGTCCCCGTTACCGCCTACGACACCCAAGGTGTGGTTGTGGTGAAAGGACATATCAAGTTGTGGATT TCAGAAAAACCACAGAAATAA
Upstream 100 bases:
>100_bases GTTATCCTAATGTTACACTCATCCGACCAGAGCAGTCCAAGCTCAACTTGGAACAGGCTCAAGATAACAATACCCTTTTG CATCATTATTAAGGATGACC
Downstream 100 bases:
>100_bases GCGTTTTACACGAGCGCAGTGCTTAATGTCTGCATTTAAAAAGGGAGCTTAGCTCCCTTTTACTTTTTTAGCCTTCAGCC GTATTTCGTTAAAAAAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily Protein
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHCACLIKKRHAVHNHIKTVHVI AICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSDILCIAEVTPEQWTPGDMLVPVTAYDTQGVVVVKGHIKLWI SEKPQK
Sequences:
>Translated_166_residues MSQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHCACLIKKRHAVHNHIKTVHVI AICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSDILCIAEVTPEQWTPGDMLVPVTAYDTQGVVVVKGHIKLWI SEKPQK >Mature_165_residues SQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHCACLIKKRHAVHNHIKTVHVIA ICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSDILCIAEVTPEQWTPGDMLVPVTAYDTQGVVVVKGHIKLWIS EKPQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18580; Mature: 18449
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHC CCCCCCCCCHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH ACLIKKRHAVHNHIKTVHVIAICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSD HHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCC ILCIAEVTPEQWTPGDMLVPVTAYDTQGVVVVKGHIKLWISEKPQK EEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCC >Mature Secondary Structure SQTDSSSTAEQKPNKVLALYHKTRRYPFGQKLFSIMVSRMAPYFGTIKPLITELRLNHC CCCCCCCCHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH ACLIKKRHAVHNHIKTVHVIAICNGLEMAMGVMAEASIPKHLRWIPKGMSLDYTAKAGSD HHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCC ILCIAEVTPEQWTPGDMLVPVTAYDTQGVVVVKGHIKLWISEKPQK EEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA