| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876229
Identifier: 160876229
GI number: 160876229
Start: 3686149
End: 3687174
Strand: Direct
Name: 160876229
Synonym: Sbal195_3123
Alternate gene names: NA
Gene position: 3686149-3687174 (Clockwise)
Preceding gene: 160876228
Following gene: 160876233
Centisome position: 68.93
GC content: 38.79
Gene sequence:
>1026_bases ATGACTTACCCAAACATTAAACCCATCGGTGGAGAGGCTGAATATGAGGCGACTCACTTTGAGGCGATCACCCAAACAGG GCGTTCATCGCTACGATTGATCATTGAAAGTGCCAAGTTACAAGGTAAACACATTGCCTTGCCTGATTATCTTTGCAAGA TTATCGTTGATATTTTTAAAGAGTATCAATCAATTATTCACTTTTACCCAATAACTCAAGATTTATCACCCGATTTTAGC GCTCTAACAGAACAATTTGATGTGTTATACATCATCAATTACTTTGGAATGGATTTTGGAAAAAGGTTAACACTGCCACT CAAGGATGGGCACACTGTCATCATCGATGATGTTTTTTATCCGATACCACGCATGATAGAAACTGCCACCGCATGCTATG CGTTTAACAGTCTGAGAAAAATATCAAAACTTGCTGATGGCAGCCTTATTATGGCTAATAGACCTTTACAGCTGGAACTA ATCACCAGCGCAACAGATTCTCAATTTTCAGCGCAAAAATACTCAGCAAAAGCCTTGAAACATCAATTCATTCATCAACA CATAAAGCCGCAAATACATTTATCTGAGCTGCAATATCTCGCTGAATTTAAACAAGCCGAACAGCTGCTCGATAGCCAAA AAAGCATCGTTGCGGCCTCAATGCAGAGTCAAATAATGGCTATGAGATTTTATAGACAATTACAAGATAATGCACAGACT AGGCAACAAAACTACTTGTGTCTTAAACATCTGCTAACAAAGAAATTAGTGCCCATTGATACTGACTTTTATTCATTTGC GGTGTTCAAACATACACAAAAAAACGAGTTAAAACAGTTTCTTGCTAGCCAAAGCATCTACCTCCCGACGCATTGGCCCG TGTTAGAAAACGATTCACTGAAGGCAATCAATGCTATTAGTGTTAATTGGCTATCAATTCCACTCGATACTCGCTATACA GTTCAGGACATGGAACGATTATCAAAAGTCATATTAGACTTTGACCAACGCTCACCTTGTTTCTAA
Upstream 100 bases:
>100_bases AAACAGACTCAAAATCCTTACGATCAAGGTGGAAGTTCTCTCAAGATTAAAGAGATAATCAAGCAGTTTGATCTCAGTAA TCTAGAAATGAAACGCTTTT
Downstream 100 bases:
>100_bases GCTAATTTTCCAATCTGCAGTAGCATTGTTGCTGCTAGCTTATTTTGCGGCTCAACATCCAATACATAATCACATGCAAT TTGTGCAGACTCTATCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTYPNIKPIGGEAEYEATHFEAITQTGRSSLRLIIESAKLQGKHIALPDYLCKIIVDIFKEYQSIIHFYPITQDLSPDFS ALTEQFDVLYIINYFGMDFGKRLTLPLKDGHTVIIDDVFYPIPRMIETATACYAFNSLRKISKLADGSLIMANRPLQLEL ITSATDSQFSAQKYSAKALKHQFIHQHIKPQIHLSELQYLAEFKQAEQLLDSQKSIVAASMQSQIMAMRFYRQLQDNAQT RQQNYLCLKHLLTKKLVPIDTDFYSFAVFKHTQKNELKQFLASQSIYLPTHWPVLENDSLKAINAISVNWLSIPLDTRYT VQDMERLSKVILDFDQRSPCF
Sequences:
>Translated_341_residues MTYPNIKPIGGEAEYEATHFEAITQTGRSSLRLIIESAKLQGKHIALPDYLCKIIVDIFKEYQSIIHFYPITQDLSPDFS ALTEQFDVLYIINYFGMDFGKRLTLPLKDGHTVIIDDVFYPIPRMIETATACYAFNSLRKISKLADGSLIMANRPLQLEL ITSATDSQFSAQKYSAKALKHQFIHQHIKPQIHLSELQYLAEFKQAEQLLDSQKSIVAASMQSQIMAMRFYRQLQDNAQT RQQNYLCLKHLLTKKLVPIDTDFYSFAVFKHTQKNELKQFLASQSIYLPTHWPVLENDSLKAINAISVNWLSIPLDTRYT VQDMERLSKVILDFDQRSPCF >Mature_340_residues TYPNIKPIGGEAEYEATHFEAITQTGRSSLRLIIESAKLQGKHIALPDYLCKIIVDIFKEYQSIIHFYPITQDLSPDFSA LTEQFDVLYIINYFGMDFGKRLTLPLKDGHTVIIDDVFYPIPRMIETATACYAFNSLRKISKLADGSLIMANRPLQLELI TSATDSQFSAQKYSAKALKHQFIHQHIKPQIHLSELQYLAEFKQAEQLLDSQKSIVAASMQSQIMAMRFYRQLQDNAQTR QQNYLCLKHLLTKKLVPIDTDFYSFAVFKHTQKNELKQFLASQSIYLPTHWPVLENDSLKAINAISVNWLSIPLDTRYTV QDMERLSKVILDFDQRSPCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39317; Mature: 39186
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPNIKPIGGEAEYEATHFEAITQTGRSSLRLIIESAKLQGKHIALPDYLCKIIVDIFK CCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHH EYQSIIHFYPITQDLSPDFSALTEQFDVLYIINYFGMDFGKRLTLPLKDGHTVIIDDVFY HHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEHHCCCCCCEEEEEECCCCEEEECCHHH PIPRMIETATACYAFNSLRKISKLADGSLIMANRPLQLELITSATDSQFSAQKYSAKALK CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHH HQFIHQHIKPQIHLSELQYLAEFKQAEQLLDSQKSIVAASMQSQIMAMRFYRQLQDNAQT HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQNYLCLKHLLTKKLVPIDTDFYSFAVFKHTQKNELKQFLASQSIYLPTHWPVLENDSL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCCCCCCC KAINAISVNWLSIPLDTRYTVQDMERLSKVILDFDQRSPCF CEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TYPNIKPIGGEAEYEATHFEAITQTGRSSLRLIIESAKLQGKHIALPDYLCKIIVDIFK CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHH EYQSIIHFYPITQDLSPDFSALTEQFDVLYIINYFGMDFGKRLTLPLKDGHTVIIDDVFY HHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEHHCCCCCCEEEEEECCCCEEEECCHHH PIPRMIETATACYAFNSLRKISKLADGSLIMANRPLQLELITSATDSQFSAQKYSAKALK CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHH HQFIHQHIKPQIHLSELQYLAEFKQAEQLLDSQKSIVAASMQSQIMAMRFYRQLQDNAQT HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQNYLCLKHLLTKKLVPIDTDFYSFAVFKHTQKNELKQFLASQSIYLPTHWPVLENDSL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCCCCCCC KAINAISVNWLSIPLDTRYTVQDMERLSKVILDFDQRSPCF CEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA