| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876227
Identifier: 160876227
GI number: 160876227
Start: 3683998
End: 3685002
Strand: Direct
Name: 160876227
Synonym: Sbal195_3121
Alternate gene names: NA
Gene position: 3683998-3685002 (Clockwise)
Preceding gene: 160876226
Following gene: 160876228
Centisome position: 68.89
GC content: 42.39
Gene sequence:
>1005_bases ATGACGAACAAAACCTTCATCATTGCCGAAGCTGGCGTTAATCATAATGGTGATATTCAGCTGGCAAAGGCACTTATCGA CGCAGCGGTAGCCGCTGGAGTGGATTGCGTTAAATTCCAGACATGGAAAACAGAGCTATTAGTCACGCAAAAAGCCGAGA TGGCACAGTATCAAATTGAAAATACGAAAGAGAACATATCCCAATTTGATATGCTCAAAGCACTAGAATTAAGCTATCCA GATTTTGTTGAACTCAAAGCCTATTGCGAGCAACGTAGCATTATATTCATGTCAACGCCTGATGAAACTGAAAGTGCCAC CTTTTTAAATGGCCTGCAAAATCAATTTAAAATTGGTTCGGGCGAGCTTACCAACCTCCCCTTTTTAGCGCATATTGCCA GCTTTGGTAAGCCTGTGATCCTTTCTACAGGAATGAGTAACTTAAGCGAAATAGAACTGGCTCTGGAAGTACTGCAACAA CACGGTATTTCGTTAGAGATGATCACCGTCTTACACGCAACAACGCAATATCCAACCCCAATGGATGAAGTGAATTTATC GGCAATGAATACCATTAAACATGCATTTCCTGGTATTAAAGTGGGCTATTCCGATCACACATTAGGAATTGAAATTCCGA TTGCAGCGGTTGCACTTGGCGCAACCATTATCGAGAAGCATTTTACGTTAGATAAGCACATGATAGGACCGGATCATAAA GCAAGTCTCGAACCACCTGAGTTAAAGCAAATGGTCAATGCTATACGAAATTTAGAAGTCGCGCTGGGTAACGGCCAAAA GATTCCTAGTAAAAGTGAAATAGATAACAAACGGATCGTGCGTAAAAGTATTGTCGCAGCCAAGGTCATAAAGAAGGGGG CAATACTAACCGAAGATGCATTAACTATTATGCGTCCAGGCACAGGGTTACCTCCGAGTCGCTGGAATGAAGTGATTGGT TCAGCAGCTAAAGTTGATTATGCGGAGGGGGATCTTATCCAATGA
Upstream 100 bases:
>100_bases CTGAGCAACGACAACGGCTCAACGATGCATGGCAAGCGCGTCATCCTGATTTGAACCTTCATCGATTTCAAAAGTATCGG CTGATACCCTAGGATATTTA
Downstream 100 bases:
>100_bases GTCGTAAAATATGTGTCGTGTCAGCGACTAGAGCCGAATATGGACTGTTAAAACCCCTGCTAACGGCTATACACTATGAT GTTGATTTGATATTGCAACT
Product: N-acylneuraminate-9-phosphate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTNKTFIIAEAGVNHNGDIQLAKALIDAAVAAGVDCVKFQTWKTELLVTQKAEMAQYQIENTKENISQFDMLKALELSYP DFVELKAYCEQRSIIFMSTPDETESATFLNGLQNQFKIGSGELTNLPFLAHIASFGKPVILSTGMSNLSEIELALEVLQQ HGISLEMITVLHATTQYPTPMDEVNLSAMNTIKHAFPGIKVGYSDHTLGIEIPIAAVALGATIIEKHFTLDKHMIGPDHK ASLEPPELKQMVNAIRNLEVALGNGQKIPSKSEIDNKRIVRKSIVAAKVIKKGAILTEDALTIMRPGTGLPPSRWNEVIG SAAKVDYAEGDLIQ
Sequences:
>Translated_334_residues MTNKTFIIAEAGVNHNGDIQLAKALIDAAVAAGVDCVKFQTWKTELLVTQKAEMAQYQIENTKENISQFDMLKALELSYP DFVELKAYCEQRSIIFMSTPDETESATFLNGLQNQFKIGSGELTNLPFLAHIASFGKPVILSTGMSNLSEIELALEVLQQ HGISLEMITVLHATTQYPTPMDEVNLSAMNTIKHAFPGIKVGYSDHTLGIEIPIAAVALGATIIEKHFTLDKHMIGPDHK ASLEPPELKQMVNAIRNLEVALGNGQKIPSKSEIDNKRIVRKSIVAAKVIKKGAILTEDALTIMRPGTGLPPSRWNEVIG SAAKVDYAEGDLIQ >Mature_333_residues TNKTFIIAEAGVNHNGDIQLAKALIDAAVAAGVDCVKFQTWKTELLVTQKAEMAQYQIENTKENISQFDMLKALELSYPD FVELKAYCEQRSIIFMSTPDETESATFLNGLQNQFKIGSGELTNLPFLAHIASFGKPVILSTGMSNLSEIELALEVLQQH GISLEMITVLHATTQYPTPMDEVNLSAMNTIKHAFPGIKVGYSDHTLGIEIPIAAVALGATIIEKHFTLDKHMIGPDHKA SLEPPELKQMVNAIRNLEVALGNGQKIPSKSEIDNKRIVRKSIVAAKVIKKGAILTEDALTIMRPGTGLPPSRWNEVIGS AAKVDYAEGDLIQ
Specific function: Unknown
COG id: COG2089
COG function: function code M; Sialic acid synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis spsE [H]
Homologues:
Organism=Homo sapiens, GI12056473, Length=331, Percent_Identity=35.6495468277946, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI21357081, Length=349, Percent_Identity=32.9512893982808, Blast_Score=175, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006190 - InterPro: IPR013785 - InterPro: IPR013132 - InterPro: IPR013974 [H]
Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]
EC number: NA
Molecular weight: Translated: 36478; Mature: 36346
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS50844 AFP_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKTFIIAEAGVNHNGDIQLAKALIDAAVAAGVDCVKFQTWKTELLVTQKAEMAQYQIE CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECHHHHHHHHHH NTKENISQFDMLKALELSYPDFVELKAYCEQRSIIFMSTPDETESATFLNGLQNQFKIGS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC GELTNLPFLAHIASFGKPVILSTGMSNLSEIELALEVLQQHGISLEMITVLHATTQYPTP CCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCC MDEVNLSAMNTIKHAFPGIKVGYSDHTLGIEIPIAAVALGATIIEKHFTLDKHMIGPDHK HHHHHHHHHHHHHHHCCCCEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC ASLEPPELKQMVNAIRNLEVALGNGQKIPSKSEIDNKRIVRKSIVAAKVIKKGAILTEDA CCCCCHHHHHHHHHHHCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEECCC LTIMRPGTGLPPSRWNEVIGSAAKVDYAEGDLIQ EEEECCCCCCCHHHHHHHHCCHHCCCCCCCCCCC >Mature Secondary Structure TNKTFIIAEAGVNHNGDIQLAKALIDAAVAAGVDCVKFQTWKTELLVTQKAEMAQYQIE CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECHHHHHHHHHH NTKENISQFDMLKALELSYPDFVELKAYCEQRSIIFMSTPDETESATFLNGLQNQFKIGS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC GELTNLPFLAHIASFGKPVILSTGMSNLSEIELALEVLQQHGISLEMITVLHATTQYPTP CCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCC MDEVNLSAMNTIKHAFPGIKVGYSDHTLGIEIPIAAVALGATIIEKHFTLDKHMIGPDHK HHHHHHHHHHHHHHHCCCCEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC ASLEPPELKQMVNAIRNLEVALGNGQKIPSKSEIDNKRIVRKSIVAAKVIKKGAILTEDA CCCCCHHHHHHHHHHHCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEECCC LTIMRPGTGLPPSRWNEVIGSAAKVDYAEGDLIQ EEEECCCCCCCHHHHHHHHCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]