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The map label for this gene is intS [C]

Identifier: 160876220

GI number: 160876220

Start: 3677442

End: 3678296

Strand: Reverse

Name: intS [C]

Synonym: Sbal195_3114

Alternate gene names: 160876220

Gene position: 3678296-3677442 (Counterclockwise)

Preceding gene: 160876230

Following gene: 160876213

Centisome position: 68.79

GC content: 46.2

Gene sequence:

>855_bases
ATGAGCATTGAAACAAGCTTCACAAAACGTGCTTTCGAACAGCTCGAAATCGGTCAAAAACGCTTCAGAATTGCGGATTT
CGGCCATAGAGACTCAATTAATGGCTTAATCTTAGATGTTTTCCCATCGGGAAAAAAGGTTTTTCGCTTTCGCCGCAAGC
ATTTAGGTAAAGACGTCACTGTGACGATCGGGGAGTTCCCGCATTTAACCATAGAGAACGCCCGTAAGCAGGCCAAGCAT
ATTGCTGTAGACTTGGCTGAAGGGGTGAATCCGAATGAGGCAAAGCGTCTTGCAAAACAAGAAGCTGAGCGCAAAGAAGC
CCTGTCGATCAGCGTTCAACAGTTGTTTGATTCCTTCGAAGCTGAGTTTATGGTCAAAATCAAAACGGGTGAGCGGCGAC
TCAATTCCCTTAAGGATATTCAATCCACATGGAAGAACCATATTCAGCCGCGCATTGCTCACTTACTTGTTGAGAATATC
ACCACTGTCGAAGCCGAAAACCTGCTCAAACTAATTATCACCAAAAACTCTGCTGCCGTTCGTAACAAATGCCTGACCTT
GCTCAAGTCGATGTTCAACGAGCAACAACTCAATCCCTTTGGCCGCATCAAAAAATTGGCTGCGGTGAAGCGTGAGCGGA
TTTTGAATCAGCATGAGGTGAGGGCATTACTTGAGTCGCTAGAATTTGAGCCGCCACTTTACCGTGATGTTGTCATGTTA
TTGCTGTTAACAGGGCAGCGTAAAAGCTGCGTGTTTAGCATGGAGTGGCGCGAGATAGATCACCAGCGCGGCGTATGGAT
TATCCCGACTAGCAAGATTTGTACTGGTCAACCCAAACTGGACACTTTTAGTTGA

Upstream 100 bases:

>100_bases
GTTTTGTGCGATTTTGACATTAACCAAAATTACTGTATTTTAGTTTAAATTAATCCCTATGGTGGCACATAGGCGGCACA
GGATTTAAGGCTAAGTCATT

Downstream 100 bases:

>100_bases
GAATTTTCAAACTCTACAGGTGACAGAGCGTCATTAGCAGAATGAAGCCGCTCCAAGTTGTAATATTTCATGTAAGCCGT
CACATCTTGCTTCATAAACT

Product: phage integrase family protein

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Phage Integrase; Phage-Related Integrase; Prophage INTEGRASE PROTEIN; Site Specific Integrase; Phage-Like Integrase; Prophage Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Integrase I; Site-Specific Recombinase; CPS-53 Prophage; DNA Integration/Recombination/Invertion Protein; Phage Integrase-Like Protein; Phage Integrase Family Site-Specific Recombinase; Phage Integrase Family Site Specific Recombinase; Integrative Genetic Element

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSIETSFTKRAFEQLEIGQKRFRIADFGHRDSINGLILDVFPSGKKVFRFRRKHLGKDVTVTIGEFPHLTIENARKQAKH
IAVDLAEGVNPNEAKRLAKQEAERKEALSISVQQLFDSFEAEFMVKIKTGERRLNSLKDIQSTWKNHIQPRIAHLLVENI
TTVEAENLLKLIITKNSAAVRNKCLTLLKSMFNEQQLNPFGRIKKLAAVKRERILNQHEVRALLESLEFEPPLYRDVVML
LLLTGQRKSCVFSMEWREIDHQRGVWIIPTSKICTGQPKLDTFS

Sequences:

>Translated_284_residues
MSIETSFTKRAFEQLEIGQKRFRIADFGHRDSINGLILDVFPSGKKVFRFRRKHLGKDVTVTIGEFPHLTIENARKQAKH
IAVDLAEGVNPNEAKRLAKQEAERKEALSISVQQLFDSFEAEFMVKIKTGERRLNSLKDIQSTWKNHIQPRIAHLLVENI
TTVEAENLLKLIITKNSAAVRNKCLTLLKSMFNEQQLNPFGRIKKLAAVKRERILNQHEVRALLESLEFEPPLYRDVVML
LLLTGQRKSCVFSMEWREIDHQRGVWIIPTSKICTGQPKLDTFS
>Mature_283_residues
SIETSFTKRAFEQLEIGQKRFRIADFGHRDSINGLILDVFPSGKKVFRFRRKHLGKDVTVTIGEFPHLTIENARKQAKHI
AVDLAEGVNPNEAKRLAKQEAERKEALSISVQQLFDSFEAEFMVKIKTGERRLNSLKDIQSTWKNHIQPRIAHLLVENIT
TVEAENLLKLIITKNSAAVRNKCLTLLKSMFNEQQLNPFGRIKKLAAVKRERILNQHEVRALLESLEFEPPLYRDVVMLL
LLTGQRKSCVFSMEWREIDHQRGVWIIPTSKICTGQPKLDTFS

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32756; Mature: 32624

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIETSFTKRAFEQLEIGQKRFRIADFGHRDSINGLILDVFPSGKKVFRFRRKHLGKDVT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEE
VTIGEFPHLTIENARKQAKHIAVDLAEGVNPNEAKRLAKQEAERKEALSISVQQLFDSFE
EEECCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AEFMVKIKTGERRLNSLKDIQSTWKNHIQPRIAHLLVENITTVEAENLLKLIITKNSAAV
CEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHH
RNKCLTLLKSMFNEQQLNPFGRIKKLAAVKRERILNQHEVRALLESLEFEPPLYRDVVML
HHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLLTGQRKSCVFSMEWREIDHQRGVWIIPTSKICTGQPKLDTFS
HHHCCCCCCEEEEEHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIETSFTKRAFEQLEIGQKRFRIADFGHRDSINGLILDVFPSGKKVFRFRRKHLGKDVT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEE
VTIGEFPHLTIENARKQAKHIAVDLAEGVNPNEAKRLAKQEAERKEALSISVQQLFDSFE
EEECCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AEFMVKIKTGERRLNSLKDIQSTWKNHIQPRIAHLLVENITTVEAENLLKLIITKNSAAV
CEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHH
RNKCLTLLKSMFNEQQLNPFGRIKKLAAVKRERILNQHEVRALLESLEFEPPLYRDVVML
HHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLLTGQRKSCVFSMEWREIDHQRGVWIIPTSKICTGQPKLDTFS
HHHCCCCCCEEEEEHHHHHHCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA