| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876213
Identifier: 160876213
GI number: 160876213
Start: 3671989
End: 3672621
Strand: Reverse
Name: 160876213
Synonym: Sbal195_3107
Alternate gene names: NA
Gene position: 3672621-3671989 (Counterclockwise)
Preceding gene: 160876220
Following gene: 160876212
Centisome position: 68.68
GC content: 44.23
Gene sequence:
>633_bases ATGCTAAAGCGTGTGATTATTCCCTTAACATTACTGATGTTAGGTGGATGTGTGGCTAAATCGGTTACACCGCCCAAGCC GAGTTTAGTGGATGGCAATGGGTTGCCGCCAACGGCAGTGATCAACCATTTAGCACAGCGAATTGTGACAGAGCTCGTTA AGCAAAATGATGCTCTGCGTTCTGATCAACCAATTGTTGTCGCAACCCCTGTATTAGTGGGTGACATGAATGGCACAAAT GCGTTGGCGCAGCAGTTACAGCAAGGATTAATGACGTCGCTCCATAGCTTTCAGTTTAATGTAGTGGATTTAAATTTAGC TGATGGCTTGAGAGTGACGGCTAATGGGGATTTTATTTTGACGCGAGATTGGCAACAATTGTCGAAAAATCTTCCCGTTG AGCATCTTGTTGTATCGACTATGAGCCCAGTTACCAATGGTATGGCGATCAATACTCGGATTGTGAACATAAGTAACAAT CGTGTGGTATCGGCCTCTCAAACTTTTGTGACTCAAAAAGAGTTGGCAAACTACATGCAGCCTTCGGAGCAAATTGTGTC ACAAAATGGCATCTTATATCGTCAGGCGAGTCCAGGCATGAATGAAGTCCGTGTTTTAGGAGATGGAAAATGA
Upstream 100 bases:
>100_bases TTTTGGTCCGAAGATTGCTGGCTTTTGTTACTCACAAAAATGAGACGCGTAGAGTGTGAGTGATTTAATTGCCAGTACAC CCACAGATGAGGTAAATCCA
Downstream 100 bases:
>100_bases AACGCTACCTTTTAGTTATTGCGGCGCTAATGCTAACTGGCTGCGCTGCTAAAGATAGATATGTGCAATGGGAAGATGTG CCGCCGCCGAGTTTTCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLKRVIIPLTLLMLGGCVAKSVTPPKPSLVDGNGLPPTAVINHLAQRIVTELVKQNDALRSDQPIVVATPVLVGDMNGTN ALAQQLQQGLMTSLHSFQFNVVDLNLADGLRVTANGDFILTRDWQQLSKNLPVEHLVVSTMSPVTNGMAINTRIVNISNN RVVSASQTFVTQKELANYMQPSEQIVSQNGILYRQASPGMNEVRVLGDGK
Sequences:
>Translated_210_residues MLKRVIIPLTLLMLGGCVAKSVTPPKPSLVDGNGLPPTAVINHLAQRIVTELVKQNDALRSDQPIVVATPVLVGDMNGTN ALAQQLQQGLMTSLHSFQFNVVDLNLADGLRVTANGDFILTRDWQQLSKNLPVEHLVVSTMSPVTNGMAINTRIVNISNN RVVSASQTFVTQKELANYMQPSEQIVSQNGILYRQASPGMNEVRVLGDGK >Mature_210_residues MLKRVIIPLTLLMLGGCVAKSVTPPKPSLVDGNGLPPTAVINHLAQRIVTELVKQNDALRSDQPIVVATPVLVGDMNGTN ALAQQLQQGLMTSLHSFQFNVVDLNLADGLRVTANGDFILTRDWQQLSKNLPVEHLVVSTMSPVTNGMAINTRIVNISNN RVVSASQTFVTQKELANYMQPSEQIVSQNGILYRQASPGMNEVRVLGDGK
Specific function: Unknown
COG id: COG5616
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22733; Mature: 22733
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRVIIPLTLLMLGGCVAKSVTPPKPSLVDGNGLPPTAVINHLAQRIVTELVKQNDALR CCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC SDQPIVVATPVLVGDMNGTNALAQQLQQGLMTSLHSFQFNVVDLNLADGLRVTANGDFIL CCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEECCCEEE TRDWQQLSKNLPVEHLVVSTMSPVTNGMAINTRIVNISNNRVVSASQTFVTQKELANYMQ ECCHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEECHHHHHHHHHHHHHCC PSEQIVSQNGILYRQASPGMNEVRVLGDGK HHHHHHHCCCEEEEECCCCCCCEEEEECCC >Mature Secondary Structure MLKRVIIPLTLLMLGGCVAKSVTPPKPSLVDGNGLPPTAVINHLAQRIVTELVKQNDALR CCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC SDQPIVVATPVLVGDMNGTNALAQQLQQGLMTSLHSFQFNVVDLNLADGLRVTANGDFIL CCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEECCCEEE TRDWQQLSKNLPVEHLVVSTMSPVTNGMAINTRIVNISNNRVVSASQTFVTQKELANYMQ ECCHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEECHHHHHHHHHHHHHCC PSEQIVSQNGILYRQASPGMNEVRVLGDGK HHHHHHHCCCEEEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA