| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876137
Identifier: 160876137
GI number: 160876137
Start: 3597411
End: 3597842
Strand: Reverse
Name: 160876137
Synonym: Sbal195_3028
Alternate gene names: NA
Gene position: 3597842-3597411 (Counterclockwise)
Preceding gene: 160876138
Following gene: 160876136
Centisome position: 67.28
GC content: 37.96
Gene sequence:
>432_bases ATGGATAACATGAGCCTGATTAATATAATTAATTTTCCTGTGTTAGGTGATGGGCGTGGCACTTTAGTCGCGCTAGAAGC AAATCGTCAGATTCCATTTGAAATTAAGCGAGTTTACTATATTTATGGCACCGCCCAAGGTGTAGCCCGTGGTTTTCATG CTCATAAAGCACTTAAGCAAGTAGCCATTTGTCTTAAAGGATCTTGCCGTTTTGTGATGGATGATGGCAAAGATAAGCAA GAAGTTATCTTGGCAAAGCCTGATAAAGGCTTATTAATAGATGCCATGCAATGGCACGAAATGTACGATTTTTCAAACGA TTGTGTATTAATGGTGTTAGCTGATCAAGTTTATGATGAATCGGACTACATTCGCGAATATTCTAAATTTATTGAGGCGG TAAATAATCATGTTCATTCATCAGCTAAGTGA
Upstream 100 bases:
>100_bases CGTAATAAATGGTTGACTGATGTACAGATAATAGCAGCAGCTAATCAGATGGCCAAAAATAGTTATGGGCAATACTTGTT TGATTTATTGGGTAAACAAA
Downstream 100 bases:
>100_bases TGTACAGAGTAGCAAAATTGGTGATGGAACTCGTGTGTGGCAGTTTGCCGTTGTGCTTAAAGAGGCCACAATTGGTCGTG ATTGTAATATTTGTGCCCAT
Product: WxcM domain-containing protein
Products: NA
Alternate protein names: WxcM Domain Protein; WxcM-Like Protein; Bifunctional Acetyl Transferase/Isomerase; Lipopolysaccharide Biosynthesis Protein; WxcM-Like; WblP Protein; FdtA-Like Protein; WxcM Domain Protein Domain Protein; Sugar Isomerase; Isomerase; DTDP-6-Deoxy-3 4-Keto-Hexulose Isomerase; Acetyl Transferase/Isomerase; Wxcm-Like DomaiN-Containing Protein; WxcM-Like Domain-Containing Protein; NDP-Hexose Isomerase; Polysaccharide Glycan Isomerase
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MDNMSLINIINFPVLGDGRGTLVALEANRQIPFEIKRVYYIYGTAQGVARGFHAHKALKQVAICLKGSCRFVMDDGKDKQ EVILAKPDKGLLIDAMQWHEMYDFSNDCVLMVLADQVYDESDYIREYSKFIEAVNNHVHSSAK
Sequences:
>Translated_143_residues MDNMSLINIINFPVLGDGRGTLVALEANRQIPFEIKRVYYIYGTAQGVARGFHAHKALKQVAICLKGSCRFVMDDGKDKQ EVILAKPDKGLLIDAMQWHEMYDFSNDCVLMVLADQVYDESDYIREYSKFIEAVNNHVHSSAK >Mature_143_residues MDNMSLINIINFPVLGDGRGTLVALEANRQIPFEIKRVYYIYGTAQGVARGFHAHKALKQVAICLKGSCRFVMDDGKDKQ EVILAKPDKGLLIDAMQWHEMYDFSNDCVLMVLADQVYDESDYIREYSKFIEAVNNHVHSSAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16232; Mature: 16232
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNMSLINIINFPVLGDGRGTLVALEANRQIPFEIKRVYYIYGTAQGVARGFHAHKALKQ CCCCEEEEEECCCEEECCCCEEEEEECCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHH VAICLKGSCRFVMDDGKDKQEVILAKPDKGLLIDAMQWHEMYDFSNDCVLMVLADQVYDE HHHHHCCCEEEEECCCCCCCEEEEECCCCCEEEHHHHHHHHHCCCCCEEEEEEECHHCCC SDYIREYSKFIEAVNNHVHSSAK HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDNMSLINIINFPVLGDGRGTLVALEANRQIPFEIKRVYYIYGTAQGVARGFHAHKALKQ CCCCEEEEEECCCEEECCCCEEEEEECCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHH VAICLKGSCRFVMDDGKDKQEVILAKPDKGLLIDAMQWHEMYDFSNDCVLMVLADQVYDE HHHHHCCCEEEEECCCCCCCEEEEECCCCCEEEHHHHHHHHHCCCCCEEEEEEECHHCCC SDYIREYSKFIEAVNNHVHSSAK HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA