| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875641
Identifier: 160875641
GI number: 160875641
Start: 2989484
End: 2990131
Strand: Direct
Name: 160875641
Synonym: Sbal195_2529
Alternate gene names: NA
Gene position: 2989484-2990131 (Clockwise)
Preceding gene: 160875639
Following gene: 160875643
Centisome position: 55.91
GC content: 45.99
Gene sequence:
>648_bases ATGCCACGATTGCCAATTGCCCAGCCACTTAGCCAACTGCCGTTTTCACAAGCGTGCGAAAACAATAAAGCGCCGATTTT AGCGGTATTAACACAAGCATTCTCACTCAACCAACATGTACTCGAAATCGGCAGTGGCACAGCGCAACATGCTGTGTATT TTGCAGCAAGTCTTCCCCATTTAATCTGGCAAACCAGCGATCAAGCTGAATATATTGAGATCATTAGCGCAAGGTGTATG CATGAAGGCAAGCTACCCAATGCAGCGGCAAACCTACGCTTACCACTTACCCTTGATGTTACCGCGCCATGGCTGGTGGA GGGATTAACACCTGATATTGATGGCGTATTTACTGCGAACACTTTGCATATTATGAGCAAAAATATGGTTGGAGCGTTTT TTACTGGTCTTGGTCTGTATCTCCCCCAACTCAAGACTCTTTGCATTTACGGTCCCTTTAACTACCAAGGCGAATTTAGC AGTGACAGCAATCACCAATTCGATACCTTTTTAAAACAGCGCGATCCCGCCAGCGGCATTCGCGATATCGAATGGATTTG CAGTTTAGCCAGCAAGCAAGGCTTAACACTCGAGCAAGATGTGGCTATGCCCGCAAATAATCGATTACTGCATTTTGTTA GAGGCTAG
Upstream 100 bases:
>100_bases GCGTGGCTCATTTTATCTTTTAAGTCTTATGCTTTTTGCTGGTTTAAGATAGGCTTGTGCGGCGTCATCCTCTTTTTATC TCAGCAACCTAGAGTCCATT
Downstream 100 bases:
>100_bases TTTCTTGTTAAAAGCTAGCTTTGGTTTAGTCCGTTTTGATCTCGGCGGTTCTATGTCCATAGCTCAACACTCGAGTGGCT TTCCACTGTTCGTCCTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPRLPIAQPLSQLPFSQACENNKAPILAVLTQAFSLNQHVLEIGSGTAQHAVYFAASLPHLIWQTSDQAEYIEIISARCM HEGKLPNAAANLRLPLTLDVTAPWLVEGLTPDIDGVFTANTLHIMSKNMVGAFFTGLGLYLPQLKTLCIYGPFNYQGEFS SDSNHQFDTFLKQRDPASGIRDIEWICSLASKQGLTLEQDVAMPANNRLLHFVRG
Sequences:
>Translated_215_residues MPRLPIAQPLSQLPFSQACENNKAPILAVLTQAFSLNQHVLEIGSGTAQHAVYFAASLPHLIWQTSDQAEYIEIISARCM HEGKLPNAAANLRLPLTLDVTAPWLVEGLTPDIDGVFTANTLHIMSKNMVGAFFTGLGLYLPQLKTLCIYGPFNYQGEFS SDSNHQFDTFLKQRDPASGIRDIEWICSLASKQGLTLEQDVAMPANNRLLHFVRG >Mature_214_residues PRLPIAQPLSQLPFSQACENNKAPILAVLTQAFSLNQHVLEIGSGTAQHAVYFAASLPHLIWQTSDQAEYIEIISARCMH EGKLPNAAANLRLPLTLDVTAPWLVEGLTPDIDGVFTANTLHIMSKNMVGAFFTGLGLYLPQLKTLCIYGPFNYQGEFSS DSNHQFDTFLKQRDPASGIRDIEWICSLASKQGLTLEQDVAMPANNRLLHFVRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=205, Percent_Identity=36.0975609756098, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71998087, Length=204, Percent_Identity=34.3137254901961, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI28574095, Length=203, Percent_Identity=31.0344827586207, Blast_Score=94, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23707; Mature: 23576
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLPIAQPLSQLPFSQACENNKAPILAVLTQAFSLNQHVLEIGSGTAQHAVYFAASLPH CCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCH LIWQTSDQAEYIEIISARCMHEGKLPNAAANLRLPLTLDVTAPWLVEGLTPDIDGVFTAN HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCEEECC TLHIMSKNMVGAFFTGLGLYLPQLKTLCIYGPFNYQGEFSSDSNHQFDTFLKQRDPASGI CCEEHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCH RDIEWICSLASKQGLTLEQDVAMPANNRLLHFVRG HHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEECC >Mature Secondary Structure PRLPIAQPLSQLPFSQACENNKAPILAVLTQAFSLNQHVLEIGSGTAQHAVYFAASLPH CCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCH LIWQTSDQAEYIEIISARCMHEGKLPNAAANLRLPLTLDVTAPWLVEGLTPDIDGVFTAN HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCEEECC TLHIMSKNMVGAFFTGLGLYLPQLKTLCIYGPFNYQGEFSSDSNHQFDTFLKQRDPASGI CCEEHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCH RDIEWICSLASKQGLTLEQDVAMPANNRLLHFVRG HHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA