| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is bcr [H]
Identifier: 160875600
GI number: 160875600
Start: 2941977
End: 2943200
Strand: Direct
Name: bcr [H]
Synonym: Sbal195_2488
Alternate gene names: 160875600
Gene position: 2941977-2943200 (Clockwise)
Preceding gene: 160875598
Following gene: 160875601
Centisome position: 55.02
GC content: 49.02
Gene sequence:
>1224_bases GTGGACCCACAATCACAACCTTCTGCCCATAACGGCAGACGTATACCGAATTTAGCGCTGCTTATTCCCATGCTTGCGGC GATTGTCGCGATCACGCCATTGGCCATCGACATGTACTTACCTGCGATGTCGACATTGGCCCTCAGTTTTCATACCGATG TCACGACAGTGCAGCAGTCCCTGAGTATCTACTTAGCGGGTTACGCGCTGGGCATGTTATGTTTCGGCCCCCTAGCCGAC CGCATTGGTCGTCGCCCTATGGTGATATTGGGACTGAGTGGATTTATGCTCACCAGCTTACTGATAGGGTTTGCGGGTCA AGTCGAAGTCTTTCTTGGACTACGTTTTTTGCAGGCTTTTATCGGCGCGGCTGCGACTGTGGTGGTACCGGGATACATCA AAGAAGTCTATGGTGATAATACCGCCAAGGGTATGTCATACGTGAGTTTAATCATGATGTTAGCGCCATTACTCGCACCT AGCATTGGCAGCGTGATCCTCGAACTCGGTGATTGGCATTTAATCTTCTTCATTCAATCCGCCTATGCCGCTACCCTGTT ATTACTGGTGCTGTTTGCGCTGAAAATGCCCAGCGATAAAGATATGGATACCCGCAGCCAAAAATCGTTTCTTGGCGCCT ATGCGACCGTATTTTCCCGCCCTGGCGTTAAGCTAAACATTGCCAGCGGCGTGTTAACGTCTTTTTCATTTTTCTGTTAT CTCACCGCATCGCCCTTCGTTTACATGGAAGTCTTTGCCTTAGATAAATCCTATTTTGCCATCTTGTTTAGCACTAACGT CGGCGCTTTGATGTTGGCCAATATCATTAATACGCGCATCGTGGGCCGTTATGGTTCGCTACGTATGTTGCATGTGTCGA CCTTTTTCGGGGCGATTGCTGGTGTCGGTTTATTAACCGTAAACCTGCTGGATATGAGCTATCACTTTACCGTGATCATG CTTATTCCTTTGATGGGTAGCCTAGGGGTGATGTCAGTCAATGCCGATGCGATAGTACTGATGAAGTTCAAGCAAGAAAC GGGAACCGCAACCGCAGTTATTGGCACCTTAAGATTTGGCTGTGGCGCACTGGCGGGCCCGTTATTGGCGGTGTTTTACG ATGGCACAGCCGTGCCCTTCTCTGCACTCATGTTAGGTTCTATTGTGTTAGTCGGTATTTGCCAATTCAACCGTCCAAAG CATCAAATACCGCCGACGGTTTAA
Upstream 100 bases:
>100_bases CAAAATGGCGGATTAATTGTGAATTGTTCTAGTACAATTTAAACCACACCGCATAAACCTGTGAAATACGCTTTCAATTC TTTCGCCACCCGAGGTAACA
Downstream 100 bases:
>100_bases GGATCTATTTTTAAGGGGCTATTTTTAAAAGCCATGGATACCAATGCCACATCGGCAACACATGTTTGATCGCGTGAAAA CAGCGCATTGGCTTTCACAG
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MDPQSQPSAHNGRRIPNLALLIPMLAAIVAITPLAIDMYLPAMSTLALSFHTDVTTVQQSLSIYLAGYALGMLCFGPLAD RIGRRPMVILGLSGFMLTSLLIGFAGQVEVFLGLRFLQAFIGAAATVVVPGYIKEVYGDNTAKGMSYVSLIMMLAPLLAP SIGSVILELGDWHLIFFIQSAYAATLLLLVLFALKMPSDKDMDTRSQKSFLGAYATVFSRPGVKLNIASGVLTSFSFFCY LTASPFVYMEVFALDKSYFAILFSTNVGALMLANIINTRIVGRYGSLRMLHVSTFFGAIAGVGLLTVNLLDMSYHFTVIM LIPLMGSLGVMSVNADAIVLMKFKQETGTATAVIGTLRFGCGALAGPLLAVFYDGTAVPFSALMLGSIVLVGICQFNRPK HQIPPTV
Sequences:
>Translated_407_residues MDPQSQPSAHNGRRIPNLALLIPMLAAIVAITPLAIDMYLPAMSTLALSFHTDVTTVQQSLSIYLAGYALGMLCFGPLAD RIGRRPMVILGLSGFMLTSLLIGFAGQVEVFLGLRFLQAFIGAAATVVVPGYIKEVYGDNTAKGMSYVSLIMMLAPLLAP SIGSVILELGDWHLIFFIQSAYAATLLLLVLFALKMPSDKDMDTRSQKSFLGAYATVFSRPGVKLNIASGVLTSFSFFCY LTASPFVYMEVFALDKSYFAILFSTNVGALMLANIINTRIVGRYGSLRMLHVSTFFGAIAGVGLLTVNLLDMSYHFTVIM LIPLMGSLGVMSVNADAIVLMKFKQETGTATAVIGTLRFGCGALAGPLLAVFYDGTAVPFSALMLGSIVLVGICQFNRPK HQIPPTV >Mature_407_residues MDPQSQPSAHNGRRIPNLALLIPMLAAIVAITPLAIDMYLPAMSTLALSFHTDVTTVQQSLSIYLAGYALGMLCFGPLAD RIGRRPMVILGLSGFMLTSLLIGFAGQVEVFLGLRFLQAFIGAAATVVVPGYIKEVYGDNTAKGMSYVSLIMMLAPLLAP SIGSVILELGDWHLIFFIQSAYAATLLLLVLFALKMPSDKDMDTRSQKSFLGAYATVFSRPGVKLNIASGVLTSFSFFCY LTASPFVYMEVFALDKSYFAILFSTNVGALMLANIINTRIVGRYGSLRMLHVSTFFGAIAGVGLLTVNLLDMSYHFTVIM LIPLMGSLGVMSVNADAIVLMKFKQETGTATAVIGTLRFGCGALAGPLLAVFYDGTAVPFSALMLGSIVLVGICQFNRPK HQIPPTV
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=392, Percent_Identity=31.1224489795918, Blast_Score=178, Evalue=5e-46, Organism=Escherichia coli, GI48994889, Length=220, Percent_Identity=33.1818181818182, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790146, Length=251, Percent_Identity=28.6852589641434, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1787065, Length=283, Percent_Identity=27.208480565371, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790794, Length=253, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87082312, Length=197, Percent_Identity=26.9035532994924, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43651; Mature: 43651
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPQSQPSAHNGRRIPNLALLIPMLAAIVAITPLAIDMYLPAMSTLALSFHTDVTTVQQS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LSIYLAGYALGMLCFGPLADRIGRRPMVILGLSGFMLTSLLIGFAGQVEVFLGLRFLQAF HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHH IGAAATVVVPGYIKEVYGDNTAKGMSYVSLIMMLAPLLAPSIGSVILELGDWHLIFFIQS HCCHHEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEHHHH AYAATLLLLVLFALKMPSDKDMDTRSQKSFLGAYATVFSRPGVKLNIASGVLTSFSFFCY HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH LTASPFVYMEVFALDKSYFAILFSTNVGALMLANIINTRIVGRYGSLRMLHVSTFFGAIA HHCCCCEEHHHEEECCCEEEEEEECCCHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHH GVGLLTVNLLDMSYHFTVIMLIPLMGSLGVMSVNADAIVLMKFKQETGTATAVIGTLRFG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHH CGALAGPLLAVFYDGTAVPFSALMLGSIVLVGICQFNRPKHQIPPTV HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDPQSQPSAHNGRRIPNLALLIPMLAAIVAITPLAIDMYLPAMSTLALSFHTDVTTVQQS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LSIYLAGYALGMLCFGPLADRIGRRPMVILGLSGFMLTSLLIGFAGQVEVFLGLRFLQAF HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHH IGAAATVVVPGYIKEVYGDNTAKGMSYVSLIMMLAPLLAPSIGSVILELGDWHLIFFIQS HCCHHEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEHHHH AYAATLLLLVLFALKMPSDKDMDTRSQKSFLGAYATVFSRPGVKLNIASGVLTSFSFFCY HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH LTASPFVYMEVFALDKSYFAILFSTNVGALMLANIINTRIVGRYGSLRMLHVSTFFGAIA HHCCCCEEHHHEEECCCEEEEEEECCCHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHH GVGLLTVNLLDMSYHFTVIMLIPLMGSLGVMSVNADAIVLMKFKQETGTATAVIGTLRFG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHH CGALAGPLLAVFYDGTAVPFSALMLGSIVLVGICQFNRPKHQIPPTV HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]