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The map label for this gene is nrdB [H]

Identifier: 160875520

GI number: 160875520

Start: 2844124

End: 2845284

Strand: Direct

Name: nrdB [H]

Synonym: Sbal195_2408

Alternate gene names: 160875520

Gene position: 2844124-2845284 (Clockwise)

Preceding gene: 160875519

Following gene: 160875521

Centisome position: 53.19

GC content: 44.88

Gene sequence:

>1161_bases
GTGGATCCCTATCCATTGGAAAATAGCACCATGGCCTACTCTACCTTCTGTCAAACACCCAACGATGCCACCCGTGAACC
TATGTTTTTAGGTCAATCGGTCAACGTGGCTCGTTACGATCAACAAAAATATGAAGTGTTCGAAAAACTGATAGAAAAGC
AGTTATCTTTCTTTTGGCGCCCGGAAGAAGTAGACGTCAGTCGCGATAAAATTGACTACGGTGCATTGCCCGATCATGAA
AAACACATCTTTATTTCTAACCTGAAATACCAAACCTTACTCGACTCGATTCAAGGTCGCTCACCCAATGTGGCCTTTTT
ACCACTGGTGTCGCTGCCTGAACTAGAGACTTGGATTGAGACTTGGTCTTTCTCTGAGACGATTCACTCGCGCTCATACA
CCCATATTATTCGCAATATCGTTAACGATCCTTCAGTGATCTTCGACGATATCGTCGTGAACAAAGAAATATTAAGCCGT
GCGACAGATATCGCCGCTTACTACGATCACTTGATCCAACTGACTCAAGTGTTCCATTTACTCGGCGCGGGTACCCATGT
TATCGATGGCAAAGAAGTCATAGTCAACACTCGTACCCTGAAAAAAGCCTTGTACCTGTGCATGATGTCAGTCAACGCCC
TAGAAGCGATTCGTTTCTATGTTAGCTTTGCCTGCTCATTTGCCTTTGCTGAACGTAAGCTAATGGAAGGTAACGCGAAA
ATCATTCGCCTGATTGCCCGTGATGAAGCACTGCACTTAAACAGCACTCAGCATATTTTAAGCATCATGCAAGGCGGTAA
AGACGATCCAGAAATGGGTGAAATTGCTGCAGAATGCCAACAGGAAGCCTTCGATTTATTCTTCAAGGCCGCAGAGCAAG
AGAAAGAATGGGCAAAATACCTGTTCAAAGACGGCTCTATGATAGGTTTGAATGAACAGATCCTCTGCCAATACGTTGAG
TTTATTACGAACCAACGGATGAAGTCGGTGAACCTGCCGCAACCTTATCCTGAAATAACCAATCCATTACCTTGGATGAA
AAACTGGTTAGAAAGCGATGCAGTGCAAGTCGCGCCTCAGGAAGTGGAAGTGTCTTCATACCTTGTCGGTCAAATTGACT
CAGCGGTTGATGGCGATGAATTCCTCGACTTCGATCTCTAA

Upstream 100 bases:

>100_bases
TAGAGAAAGAAGACGATGGTTGCGCCGGCGGCGCGTGTAAAATCTAGTCTTTAACGTTAACGCGGCTCTTACAAATAAAA
AGTATAGGGATCCCGATTGA

Downstream 100 bases:

>100_bases
GACGCTCAAAAGTGACGTTAAAAATGGCATTACAACAGTGACATCGAAAAAACGGCCACAAAACCTGTTTGCGAAGGCGC
CAATCGTGCGCCTTCAAGGT

Product: ribonucleotide-diphosphate reductase subunit beta

Products: NA

Alternate protein names: Ribonucleotide reductase small subunit [H]

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MDPYPLENSTMAYSTFCQTPNDATREPMFLGQSVNVARYDQQKYEVFEKLIEKQLSFFWRPEEVDVSRDKIDYGALPDHE
KHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILSR
ATDIAAYYDHLIQLTQVFHLLGAGTHVIDGKEVIVNTRTLKKALYLCMMSVNALEAIRFYVSFACSFAFAERKLMEGNAK
IIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGSMIGLNEQILCQYVE
FITNQRMKSVNLPQPYPEITNPLPWMKNWLESDAVQVAPQEVEVSSYLVGQIDSAVDGDEFLDFDL

Sequences:

>Translated_386_residues
MDPYPLENSTMAYSTFCQTPNDATREPMFLGQSVNVARYDQQKYEVFEKLIEKQLSFFWRPEEVDVSRDKIDYGALPDHE
KHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILSR
ATDIAAYYDHLIQLTQVFHLLGAGTHVIDGKEVIVNTRTLKKALYLCMMSVNALEAIRFYVSFACSFAFAERKLMEGNAK
IIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGSMIGLNEQILCQYVE
FITNQRMKSVNLPQPYPEITNPLPWMKNWLESDAVQVAPQEVEVSSYLVGQIDSAVDGDEFLDFDL
>Mature_386_residues
MDPYPLENSTMAYSTFCQTPNDATREPMFLGQSVNVARYDQQKYEVFEKLIEKQLSFFWRPEEVDVSRDKIDYGALPDHE
KHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILSR
ATDIAAYYDHLIQLTQVFHLLGAGTHVIDGKEVIVNTRTLKKALYLCMMSVNALEAIRFYVSFACSFAFAERKLMEGNAK
IIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKYLFKDGSMIGLNEQILCQYVE
FITNQRMKSVNLPQPYPEITNPLPWMKNWLESDAVQVAPQEVEVSSYLVGQIDSAVDGDEFLDFDL

Specific function: Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [H]

COG id: COG0208

COG function: function code F; Ribonucleotide reductase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonucleoside diphosphate reductase small chain family [H]

Homologues:

Organism=Escherichia coli, GI1788567, Length=376, Percent_Identity=75.2659574468085, Blast_Score=611, Evalue=1e-176,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009078
- InterPro:   IPR012348
- InterPro:   IPR000358 [H]

Pfam domain/function: PF00268 Ribonuc_red_sm [H]

EC number: =1.17.4.1 [H]

Molecular weight: Translated: 44314; Mature: 44314

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00368 RIBORED_SMALL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPYPLENSTMAYSTFCQTPNDATREPMFLGQSVNVARYDQQKYEVFEKLIEKQLSFFWR
CCCCCCCCCCEEHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PEEVDVSRDKIDYGALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIE
CCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
TWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILSRATDIAAYYDHLIQLTQVFHL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAGTHVIDGKEVIVNTRTLKKALYLCMMSVNALEAIRFYVSFACSFAFAERKLMEGNAK
HCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKY
EEEEEECCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWLESDAVQVAPQ
HHCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHCCHHHCCCH
EVEVSSYLVGQIDSAVDGDEFLDFDL
HHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDPYPLENSTMAYSTFCQTPNDATREPMFLGQSVNVARYDQQKYEVFEKLIEKQLSFFWR
CCCCCCCCCCEEHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PEEVDVSRDKIDYGALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIE
CCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
TWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILSRATDIAAYYDHLIQLTQVFHL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAGTHVIDGKEVIVNTRTLKKALYLCMMSVNALEAIRFYVSFACSFAFAERKLMEGNAK
HCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQEKEWAKY
EEEEEECCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWLESDAVQVAPQ
HHCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHCCHHHCCCH
EVEVSSYLVGQIDSAVDGDEFLDFDL
HHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]