Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160875375

Identifier: 160875375

GI number: 160875375

Start: 2686593

End: 2686808

Strand: Direct

Name: 160875375

Synonym: Sbal195_2263

Alternate gene names: NA

Gene position: 2686593-2686808 (Clockwise)

Preceding gene: 160875374

Following gene: 160875376

Centisome position: 50.24

GC content: 43.52

Gene sequence:

>216_bases
ATGGACTTAAGTGCCATAGTTAATCAATTGTCTCAGCTATCGACGCGCTCAGCTCAAGAGGTACAGGCCAAGATGTCTGC
AGGCGATTTGACCGATCCCGACAAGATGATCAAAGCCCAATTTGCCATGCAGCAATACTCTAACTTTGTCGGCTATGAGA
GTGCCATGATAAAAGCGATTAAAGACATGATCCAAGGGATCATTTCTAAGATTTAA

Upstream 100 bases:

>100_bases
TAGTGGTTTTAGTAATCACGCACATTTTACCGAATCGTTTAAGAAACGTTATTTATGCAGCCCAACCGTACTGCGTGCAA
CCTTTGTATAAGGAGGTCCC

Downstream 100 bases:

>100_bases
CCCCCTTCGATTGCAAGGATAAATTATGTTAACCAGTGCCGATAAACAACTGTTAGTAGAGGCTGCCATTGCCGCCTCAA
ACCATGGTCTAACATCGCAA

Product: type III secretion system needle protein

Products: NA

Alternate protein names: Type III Secretion Apparatus; Secretion System Apparatus SsaG; Secretion System Apparatus

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAIKDMIQGIISKI

Sequences:

>Translated_71_residues
MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAIKDMIQGIISKI
>Mature_71_residues
MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAIKDMIQGIISKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7829; Mature: 7829

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.5 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDMIQGIISKI
HHHHHHHHHHC
>Mature Secondary Structure
MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDMIQGIISKI
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA