| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875375
Identifier: 160875375
GI number: 160875375
Start: 2686593
End: 2686808
Strand: Direct
Name: 160875375
Synonym: Sbal195_2263
Alternate gene names: NA
Gene position: 2686593-2686808 (Clockwise)
Preceding gene: 160875374
Following gene: 160875376
Centisome position: 50.24
GC content: 43.52
Gene sequence:
>216_bases ATGGACTTAAGTGCCATAGTTAATCAATTGTCTCAGCTATCGACGCGCTCAGCTCAAGAGGTACAGGCCAAGATGTCTGC AGGCGATTTGACCGATCCCGACAAGATGATCAAAGCCCAATTTGCCATGCAGCAATACTCTAACTTTGTCGGCTATGAGA GTGCCATGATAAAAGCGATTAAAGACATGATCCAAGGGATCATTTCTAAGATTTAA
Upstream 100 bases:
>100_bases TAGTGGTTTTAGTAATCACGCACATTTTACCGAATCGTTTAAGAAACGTTATTTATGCAGCCCAACCGTACTGCGTGCAA CCTTTGTATAAGGAGGTCCC
Downstream 100 bases:
>100_bases CCCCCTTCGATTGCAAGGATAAATTATGTTAACCAGTGCCGATAAACAACTGTTAGTAGAGGCTGCCATTGCCGCCTCAA ACCATGGTCTAACATCGCAA
Product: type III secretion system needle protein
Products: NA
Alternate protein names: Type III Secretion Apparatus; Secretion System Apparatus SsaG; Secretion System Apparatus
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAIKDMIQGIISKI
Sequences:
>Translated_71_residues MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAIKDMIQGIISKI >Mature_71_residues MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAIKDMIQGIISKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7829; Mature: 7829
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDMIQGIISKI HHHHHHHHHHC >Mature Secondary Structure MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDMIQGIISKI HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA