Click here to switch to the map view.

The map label for this gene is 160875329

Identifier: 160875329

GI number: 160875329

Start: 2632639

End: 2633118

Strand: Reverse

Name: 160875329

Synonym: Sbal195_2216

Alternate gene names: NA

Gene position: 2633118-2632639 (Counterclockwise)

Preceding gene: 160875330

Following gene: 160875328

Centisome position: 49.24

GC content: 44.38

Gene sequence:

>480_bases
ATGAGCGAACAACAAGCCTGGTATAAGCAGTTCTGGCCTTGGTTTTTAATTATTCTTCCTTTATGTGCCGTCGTCGCAAG
TTTTACCACACTAAAAATTGCCCTTACGAACTCGGATTCTTTAGTCGCCGAGGATTACTACAAAGATGGCAAAGCCATTA
ATATGGACTTAAGTAAAGTAAAGTATGCCAAACAAATAGGCATGAATTTTTTACTCGAACAAACTAATAATGAAATTCTG
CTGACGCAACAAGGTGGTCCCGCTTCTCAAGCTGCGCTGAAAGTCGAGTTCTACCATCCAACCATTGCCGACAGAGACAT
CAAGCTCACCGCTACAGCCGATGCCAGTAATGTGTATCGCATTACCGTGCCTGCCACCCTGATCGGCCCTTGGGAAGTGC
GTCTGGAAAGTTACGATGGCAAATGGCGTATTCACCAACGCGTTGAATTAAAAGATCATGTCCAACTTTGGCTGAACTGA

Upstream 100 bases:

>100_bases
GTAATGCTAAGGCCTCGAAGACTTCGAGGCCTTTTTTTTAAAGTGCTAAAACCGTCTTTTAACGGTAAAATGGCGCAAAT
TTTTTGAATGGGTATCTGAC

Downstream 100 bases:

>100_bases
TTGTGGTTGAATTGATTTAGTTAAATAAGAATTGCTATGACACATCCAAGTTGTTTTCACTGCCAAGAGCCCGTGCTGAC
GGGCCAGCAGTTTGTGACTC

Product: hypothetical protein

Products: NA

Alternate protein names: Inner Membrane Protein; Cytochrome C Oxidase Accessory Protein CcoH

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSEQQAWYKQFWPWFLIILPLCAVVASFTTLKIALTNSDSLVAEDYYKDGKAINMDLSKVKYAKQIGMNFLLEQTNNEIL
LTQQGGPASQAALKVEFYHPTIADRDIKLTATADASNVYRITVPATLIGPWEVRLESYDGKWRIHQRVELKDHVQLWLN

Sequences:

>Translated_159_residues
MSEQQAWYKQFWPWFLIILPLCAVVASFTTLKIALTNSDSLVAEDYYKDGKAINMDLSKVKYAKQIGMNFLLEQTNNEIL
LTQQGGPASQAALKVEFYHPTIADRDIKLTATADASNVYRITVPATLIGPWEVRLESYDGKWRIHQRVELKDHVQLWLN
>Mature_158_residues
SEQQAWYKQFWPWFLIILPLCAVVASFTTLKIALTNSDSLVAEDYYKDGKAINMDLSKVKYAKQIGMNFLLEQTNNEILL
TQQGGPASQAALKVEFYHPTIADRDIKLTATADASNVYRITVPATLIGPWEVRLESYDGKWRIHQRVELKDHVQLWLN

Specific function: Unknown

COG id: COG3198

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18233; Mature: 18102

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQQAWYKQFWPWFLIILPLCAVVASFTTLKIALTNSDSLVAEDYYKDGKAINMDLSKV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEHHHHCCCCEEECCHHHH
KYAKQIGMNFLLEQTNNEILLTQQGGPASQAALKVEFYHPTIADRDIKLTATADASNVYR
HHHHHHCHHEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEE
ITVPATLIGPWEVRLESYDGKWRIHQRVELKDHVQLWLN
EEECEEEECCEEEEEECCCCEEEEEEECCCCCEEEEECC
>Mature Secondary Structure 
SEQQAWYKQFWPWFLIILPLCAVVASFTTLKIALTNSDSLVAEDYYKDGKAINMDLSKV
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEHHHHCCCCEEECCHHHH
KYAKQIGMNFLLEQTNNEILLTQQGGPASQAALKVEFYHPTIADRDIKLTATADASNVYR
HHHHHHCHHEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEE
ITVPATLIGPWEVRLESYDGKWRIHQRVELKDHVQLWLN
EEECEEEECCEEEEEECCCCEEEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA