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The map label for this gene is ydaL [H]

Identifier: 160875282

GI number: 160875282

Start: 2576801

End: 2577391

Strand: Direct

Name: ydaL [H]

Synonym: Sbal195_2169

Alternate gene names: 160875282

Gene position: 2576801-2577391 (Clockwise)

Preceding gene: 160875279

Following gene: 160875284

Centisome position: 48.19

GC content: 49.41

Gene sequence:

>591_bases
ATGCTGGATGATGAATCAGCACTGTTTTTTGAGGAAATGGCCGGAGTTGTACCACTAAAAGGCGAGATGCCTGCGGTGAG
TTTCGCGCCCAAAGCGTTAACGGCAGAGCAAATTCACAGACGCGATGCCTTACAAAGGGAAGCTTATTTAGCGTGTATGC
CACTGGATTTGAAAGCGTTTGTGCAGCAAGCGCCGGATGACATTGTCAGCTTTAAACGTGAAGGGGTACAAGGCGGCGTT
TTTAAACGACTCCGAATGGGGCAATACAGCATCAAGATGGAGCTTGATGTGCATGCTTATCGGTTAAACCAAGCTCGTGA
TGCCGTCCTTAACTATTTACTGGCAGCGCAGGCGCATGGTGAACGCTGTGTCATGTTGATCCACGGTAAAGGCTATCAGA
GTCAACCCTTTGCGGGATTGCTCAAATCCGCTGTGTGTTGTTGGTTATCACAGTTGGATATGGTGCTGGCCTATCATTCG
GCGAAAACTGAGCAGGGCGGCACTGGGGCGCTGTATGTGATGTTAACTAAGTCCGAACAGTTAAAGCTTGAAAACCGTGA
AGCCAATCGTAAAGGCATGGGCTGGCGTTAG

Upstream 100 bases:

>100_bases
CAATCATGGCGTCACTATAATGGAGCCGCCCGCTGAACTAAAGCCTTGAATGATTACAAAGTGTGTTTCTGTACAAGAGT
GTGAAGTAAAGGAGCTTGCC

Downstream 100 bases:

>100_bases
ACCAAAACAGGCCCAGTATTTGATAAAAAGTATTGAAGAAATAACATGGAATAAAAATGCCCAATCTCGTTGGGCATTTT
GCTTTATGCAATTTGGCGAT

Product: Smr protein/MutS2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLDDESALFFEEMAGVVPLKGEMPAVSFAPKALTAEQIHRRDALQREAYLACMPLDLKAFVQQAPDDIVSFKREGVQGGV
FKRLRMGQYSIKMELDVHAYRLNQARDAVLNYLLAAQAHGERCVMLIHGKGYQSQPFAGLLKSAVCCWLSQLDMVLAYHS
AKTEQGGTGALYVMLTKSEQLKLENREANRKGMGWR

Sequences:

>Translated_196_residues
MLDDESALFFEEMAGVVPLKGEMPAVSFAPKALTAEQIHRRDALQREAYLACMPLDLKAFVQQAPDDIVSFKREGVQGGV
FKRLRMGQYSIKMELDVHAYRLNQARDAVLNYLLAAQAHGERCVMLIHGKGYQSQPFAGLLKSAVCCWLSQLDMVLAYHS
AKTEQGGTGALYVMLTKSEQLKLENREANRKGMGWR
>Mature_196_residues
MLDDESALFFEEMAGVVPLKGEMPAVSFAPKALTAEQIHRRDALQREAYLACMPLDLKAFVQQAPDDIVSFKREGVQGGV
FKRLRMGQYSIKMELDVHAYRLNQARDAVLNYLLAAQAHGERCVMLIHGKGYQSQPFAGLLKSAVCCWLSQLDMVLAYHS
AKTEQGGTGALYVMLTKSEQLKLENREANRKGMGWR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1787602, Length=188, Percent_Identity=35.1063829787234, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 21941; Mature: 21941

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDDESALFFEEMAGVVPLKGEMPAVSFAPKALTAEQIHRRDALQREAYLACMPLDLKAF
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHH
VQQAPDDIVSFKREGVQGGVFKRLRMGQYSIKMELDVHAYRLNQARDAVLNYLLAAQAHG
HHHCCHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
ERCVMLIHGKGYQSQPFAGLLKSAVCCWLSQLDMVLAYHSAKTEQGGTGALYVMLTKSEQ
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC
LKLENREANRKGMGWR
EEECCCCCCCCCCCCC
>Mature Secondary Structure
MLDDESALFFEEMAGVVPLKGEMPAVSFAPKALTAEQIHRRDALQREAYLACMPLDLKAF
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHH
VQQAPDDIVSFKREGVQGGVFKRLRMGQYSIKMELDVHAYRLNQARDAVLNYLLAAQAHG
HHHCCHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
ERCVMLIHGKGYQSQPFAGLLKSAVCCWLSQLDMVLAYHSAKTEQGGTGALYVMLTKSEQ
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC
LKLENREANRKGMGWR
EEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]