| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is iaaA [H]
Identifier: 160875052
GI number: 160875052
Start: 2314313
End: 2315293
Strand: Direct
Name: iaaA [H]
Synonym: Sbal195_1937
Alternate gene names: 160875052
Gene position: 2314313-2315293 (Clockwise)
Preceding gene: 160875049
Following gene: 160875053
Centisome position: 43.28
GC content: 50.56
Gene sequence:
>981_bases ATGTCACACAACACCTTTGCCAATGACAAACCGTTCGCGATTGCGATCCACGGCGGCGCTGGCACGATTTCTAAGGCTAA TCTCACCCCTGAACAACGCCAAGCCTACAAAGATAAGTTAAAGGAAGCCGTTGATAAAGGCTCAAAAGTGTTAGAAGAGG GCGGTGACAGTTTAGTCGCGGTGCAAACAGCCATTAATATTCTCGAAAATAGCCCACTGTTCAATGCTGGCATAGGCGCG GTGTACACCTATGACGGCGGGCATGAGTTAGATGCGTCCATTATGGATGGCAAAACCATGAATGCTGGCGCAATTGCTGG AGTGCGCCATATCGCCAATCCCATTGATCTCGCTTTAGCCGTGATGGATAAGTCTGAGCATGTGATGCTCTCGGGCGCAG GTGCAGAAGAATTTGCCCTGACTCAAGGCTTTAGCTTAGTGCCAAACAGTCATTTTGATACTGACGAGCGTTATCAGCAA TTACTCGATGCTCGCCAAAAACTGCAAGCTGCGGCTAAATCAGAGCAAGTCGCGGGTGTTGAGATGAAAGATCTCGATTA CAAATTTGGTACCGTAGGCGCCGTCGCCTTAGACAAAAATGGCAACTTAGCTGCTGGTACCTCAACCGGCGGCATGACGG CAAAACGCTTCGGCCGCATTGGAGATTCCCCTGTGATTGGTGCCGGTACTTATGCTGAAAATGGGGTGTGCGCCGTATCG GCAACCGGCCATGGTGAGTTCTTTATTCGTTATCAAGTGGCGGGGGATATTTGTGCCAAAGTAAAATACCAGCAGAAATC CATTATTCAAGCCGCCGATGAAGTGATCAATCAACGTCTTATCACCGCTGGTGGTTCGGGCGGCGTGATTGCCGTCGATC AGCGCGGTAATATCGCCACGCCATTTAACACTGAAGGCATGTACCGCGCTACCCGTAGCAATGGCGAACCCGCCCAAGTG CTGATCTGGCAAGACCAATAA
Upstream 100 bases:
>100_bases CACGATGAAATGGGTACAAAGGACGCTACTTTTTAAGGGGATGTAAAGAATGAAAACAAAATTAGCCACCTTTAGTTTAA TTATCTCGGGTTTACTTTTT
Downstream 100 bases:
>100_bases CTTAAATTGTAAAAGCAGTTGGTTCGAGACGGACATTGCTTACAAGATTGTCTAGAAACATCACTTATAAACCTTAAAAA GCGAGTGCTGCGAAAGTGGC
Product: peptidase T2 asparaginase 2
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSHNTFANDKPFAIAIHGGAGTISKANLTPEQRQAYKDKLKEAVDKGSKVLEEGGDSLVAVQTAINILENSPLFNAGIGA VYTYDGGHELDASIMDGKTMNAGAIAGVRHIANPIDLALAVMDKSEHVMLSGAGAEEFALTQGFSLVPNSHFDTDERYQQ LLDARQKLQAAAKSEQVAGVEMKDLDYKFGTVGAVALDKNGNLAAGTSTGGMTAKRFGRIGDSPVIGAGTYAENGVCAVS ATGHGEFFIRYQVAGDICAKVKYQQKSIIQAADEVINQRLITAGGSGGVIAVDQRGNIATPFNTEGMYRATRSNGEPAQV LIWQDQ
Sequences:
>Translated_326_residues MSHNTFANDKPFAIAIHGGAGTISKANLTPEQRQAYKDKLKEAVDKGSKVLEEGGDSLVAVQTAINILENSPLFNAGIGA VYTYDGGHELDASIMDGKTMNAGAIAGVRHIANPIDLALAVMDKSEHVMLSGAGAEEFALTQGFSLVPNSHFDTDERYQQ LLDARQKLQAAAKSEQVAGVEMKDLDYKFGTVGAVALDKNGNLAAGTSTGGMTAKRFGRIGDSPVIGAGTYAENGVCAVS ATGHGEFFIRYQVAGDICAKVKYQQKSIIQAADEVINQRLITAGGSGGVIAVDQRGNIATPFNTEGMYRATRSNGEPAQV LIWQDQ >Mature_325_residues SHNTFANDKPFAIAIHGGAGTISKANLTPEQRQAYKDKLKEAVDKGSKVLEEGGDSLVAVQTAINILENSPLFNAGIGAV YTYDGGHELDASIMDGKTMNAGAIAGVRHIANPIDLALAVMDKSEHVMLSGAGAEEFALTQGFSLVPNSHFDTDERYQQL LDARQKLQAAAKSEQVAGVEMKDLDYKFGTVGAVALDKNGNLAAGTSTGGMTAKRFGRIGDSPVIGAGTYAENGVCAVSA TGHGEFFIRYQVAGDICAKVKYQQKSIIQAADEVINQRLITAGGSGGVIAVDQRGNIATPFNTEGMYRATRSNGEPAQVL IWQDQ
Specific function: Degrades proteins damaged by L-isoaspartyl residue formation (also known as beta-Asp residues). Degrades L- isoaspartyl-containing di- and tripeptides. Acts best on iso-Asp- Leu, followed by iso-Asp-Ala, -His and to a lesser extent iso-Asp- Lys, -Phe and
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=306, Percent_Identity=38.562091503268, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI145275200, Length=306, Percent_Identity=38.562091503268, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI98991769, Length=323, Percent_Identity=29.4117647058824, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI285002251, Length=231, Percent_Identity=32.9004329004329, Blast_Score=95, Evalue=9e-20, Organism=Escherichia coli, GI1787050, Length=313, Percent_Identity=50.7987220447284, Blast_Score=294, Evalue=7e-81, Organism=Drosophila melanogaster, GI18921183, Length=305, Percent_Identity=37.0491803278689, Blast_Score=167, Evalue=9e-42, Organism=Drosophila melanogaster, GI21357893, Length=271, Percent_Identity=33.5793357933579, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI221330102, Length=232, Percent_Identity=33.1896551724138, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24652135, Length=232, Percent_Identity=33.1896551724138, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 34355; Mature: 34224
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHNTFANDKPFAIAIHGGAGTISKANLTPEQRQAYKDKLKEAVDKGSKVLEEGGDSLVA CCCCCCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VQTAINILENSPLFNAGIGAVYTYDGGHELDASIMDGKTMNAGAIAGVRHIANPIDLALA HHHHHHHHHCCCCCCCCCCEEEEECCCCEECCEEECCCCCCCHHHHHHHHHCCHHHEEEE VMDKSEHVMLSGAGAEEFALTQGFSLVPNSHFDTDERYQQLLDARQKLQAAAKSEQVAGV EECCCCEEEEECCCCHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCC EMKDLDYKFGTVGAVALDKNGNLAAGTSTGGMTAKRFGRIGDSPVIGAGTYAENGVCAVS CHHCCCEECCCEEEEEECCCCCEEECCCCCCCCHHHHCCCCCCCEEECCCCCCCCEEEEE ATGHGEFFIRYQVAGDICAKVKYQQKSIIQAADEVINQRLITAGGSGGVIAVDQRGNIAT ECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCC PFNTEGMYRATRSNGEPAQVLIWQDQ CCCCCCCEEEECCCCCCEEEEEEECC >Mature Secondary Structure SHNTFANDKPFAIAIHGGAGTISKANLTPEQRQAYKDKLKEAVDKGSKVLEEGGDSLVA CCCCCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VQTAINILENSPLFNAGIGAVYTYDGGHELDASIMDGKTMNAGAIAGVRHIANPIDLALA HHHHHHHHHCCCCCCCCCCEEEEECCCCEECCEEECCCCCCCHHHHHHHHHCCHHHEEEE VMDKSEHVMLSGAGAEEFALTQGFSLVPNSHFDTDERYQQLLDARQKLQAAAKSEQVAGV EECCCCEEEEECCCCHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCC EMKDLDYKFGTVGAVALDKNGNLAAGTSTGGMTAKRFGRIGDSPVIGAGTYAENGVCAVS CHHCCCEECCCEEEEEECCCCCEEECCCCCCCCHHHHCCCCCCCEEECCCCCCCCEEEEE ATGHGEFFIRYQVAGDICAKVKYQQKSIIQAADEVINQRLITAGGSGGVIAVDQRGNIAT ECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCC PFNTEGMYRATRSNGEPAQVLIWQDQ CCCCCCCEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]