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The map label for this gene is qseC [H]

Identifier: 160875043

GI number: 160875043

Start: 2298889

End: 2300286

Strand: Direct

Name: qseC [H]

Synonym: Sbal195_1928

Alternate gene names: 160875043

Gene position: 2298889-2300286 (Clockwise)

Preceding gene: 160875042

Following gene: 160875044

Centisome position: 42.99

GC content: 47.35

Gene sequence:

>1398_bases
GTGATTCGATTAAAGGGGTTGGATGTGTATTCACTGCGTTTGGTACTGACATTATTGATTTTGTCAGGTATTTCAGTGTC
CGTTGCTGTCTCTAGCTGGTTGAGTACTCGGGATTCTAAGCATCAAATTGAAGAACTCTTCGATGCGCAAATGCTGCAAA
CCGCGAAAATGCTGGAGCTGTTTTATCACACTGAGCCCGGTACGACGCCCCAGAGTACCGCGAGACCGCAAGTGCTCCAC
GTTCCCGATAGCCAGATCAGTTCCTTTGCCGAAAAAGCCGATGCCCTGAAACTCGCCTATGAGCATAAATTGGCGTTTCA
AATTTGGAGTGAGGCGGGCGAAGCCTTAGTGCTGTCGGACAATATTGGCCATCAACCTATCACCCGATTCGTGCAGGGTT
ATCACAAGAAAGTGTTCGAAGGTGAACTCTGGCATGTGTTCAGTTTTTTCTCGGTCAAAAATCATGTTTGGATTGTCACC
GCTCAGCAGGATGAAGTGCGCCAAGAGCTCGTATCACAAATCATGCATAACGCGGTTATCGTGCCCTTGATTGTGGTGCC
TTTGACACTACTTATCGTTAGCCTATTGTTTTATCTATTGTTCCGGCCGTTAAAAACCTTTGAAAGGGAGCTGATTGGGC
GGGCGCCGAACGATCTTACGCCGCTGACTATGTCGCTACCGAAAGAGCTCGTACCCGTTCGCCGTGCATTAAACCTATAT
ATCAATAGCATAGCTAGATTCATAGCCCGTGAACGCCGTTTTAGCGCCGATGCCGCCCATGAACTGAAAACCCCCTTATC
TGTGATTAAATTACATCAACACGGTTTAGAGAGCCTTATTGATGATGATCCGCAGCAGAAATTTCATCTAGCCGCGATTG
ATGCTGGCGTGGTGCACATGAGTCATACCGTTGAACAGTTACTCGTGTTAGCGAGGGTGGATTCGATAAATGAGCTCAAT
GTGTCATCCCACGCTATCTTGCCTATGGTTGAAGATGCGCTTAATCAACTGATGCCACAAATCACCGATTATGAATGGAA
TATCGATATCGCGCCCCAGCAGACCGTGACCTGCGATCGTTTCTATCTGCTACTGGTGCTAAAGAATATTATTGAAAATG
CCTGCAAATACAGCCCGCAGGAATCAGAAATCTCAGTGTCGGCCCATTCACTGGGTGATGAGATTAGTATCTGTATTGCG
GATCGCGGCCAAGGCATGACAGAGGAGCAGATTGCTAATGCCACAGAGCGTTTTTATCGTGTGAATGAAAATGAAGGCAT
AGGTGCGGGTTTAGGTTTGTCTATCTGCCATCACATCATTGAATTGCACCAAGGCCGTTTAGTGATAGCGCCCAGGGAGA
AGGGCGGATTATCTGTGACTCTTTTTCTGCCGCAATAG

Upstream 100 bases:

>100_bases
TGATTGAAATAAACTAATTCACTGAATTAAGTGACAATACTCACGTTTGTGGGTATTGATACCTCAATCATTCGCTGAGG
GTAAACGTTAGGAAACTAAA

Downstream 100 bases:

>100_bases
TTCAGAAGTTAACATCTTAAAATAGATCCGCAGTTTAAGTGACATCACCTCAGTGGTTTTGATACATTTGGGTGAGTGTA
ATTGTGAGTTTGTCTGCTAT

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLELFYHTEPGTTPQSTARPQVLH
VPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSDNIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVT
AQQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHMSHTVEQLLVLARVDSINELN
VSSHAILPMVEDALNQLMPQITDYEWNIDIAPQQTVTCDRFYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIA
DRGQGMTEEQIANATERFYRVNENEGIGAGLGLSICHHIIELHQGRLVIAPREKGGLSVTLFLPQ

Sequences:

>Translated_465_residues
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLELFYHTEPGTTPQSTARPQVLH
VPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSDNIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVT
AQQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHMSHTVEQLLVLARVDSINELN
VSSHAILPMVEDALNQLMPQITDYEWNIDIAPQQTVTCDRFYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIA
DRGQGMTEEQIANATERFYRVNENEGIGAGLGLSICHHIIELHQGRLVIAPREKGGLSVTLFLPQ
>Mature_465_residues
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLELFYHTEPGTTPQSTARPQVLH
VPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSDNIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVT
AQQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHMSHTVEQLLVLARVDSINELN
VSSHAILPMVEDALNQLMPQITDYEWNIDIAPQQTVTCDRFYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIA
DRGQGMTEEQIANATERFYRVNENEGIGAGLGLSICHHIIELHQGRLVIAPREKGGLSVTLFLPQ

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=463, Percent_Identity=30.4535637149028, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI1790551, Length=285, Percent_Identity=32.280701754386, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788393, Length=255, Percent_Identity=27.0588235294118, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788279, Length=293, Percent_Identity=27.6450511945392, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=26.9565217391304, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1786912, Length=212, Percent_Identity=28.7735849056604, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786783, Length=303, Percent_Identity=23.1023102310231, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082128, Length=297, Percent_Identity=25.5892255892256, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787374, Length=277, Percent_Identity=24.5487364620939, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789808, Length=323, Percent_Identity=23.2198142414861, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1790436, Length=217, Percent_Identity=30.4147465437788, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1790861, Length=209, Percent_Identity=22.9665071770335, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 52329; Mature: 52329

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLEL
CEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FYHTEPGTTPQSTARPQVLHVPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSD
HHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
NIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVTAQQDEVRQELVSQIMHNAVI
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHH
VPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHH
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHM
HHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHH
SHTVEQLLVLARVDSINELNVSSHAILPMVEDALNQLMPQITDYEWNIDIAPQQTVTCDR
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
FYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIADRGQGMTEEQIANATERFYR
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHEE
VNENEGIGAGLGLSICHHIIELHQGRLVIAPREKGGLSVTLFLPQ
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLEL
CEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FYHTEPGTTPQSTARPQVLHVPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSD
HHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
NIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVTAQQDEVRQELVSQIMHNAVI
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHH
VPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHH
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHM
HHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHH
SHTVEQLLVLARVDSINELNVSSHAILPMVEDALNQLMPQITDYEWNIDIAPQQTVTCDR
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
FYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIADRGQGMTEEQIANATERFYR
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHEE
VNENEGIGAGLGLSICHHIIELHQGRLVIAPREKGGLSVTLFLPQ
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]