| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874975
Identifier: 160874975
GI number: 160874975
Start: 2223801
End: 2224589
Strand: Direct
Name: 160874975
Synonym: Sbal195_1860
Alternate gene names: NA
Gene position: 2223801-2224589 (Clockwise)
Preceding gene: 160874974
Following gene: 160874976
Centisome position: 41.59
GC content: 35.61
Gene sequence:
>789_bases ATGAAAATTTTATATCTCTTATTCTTTTGTTTCTTTTCTATTGGCAGTGATGCCGTAGTGATGAGACATGACATTCCCCC TGAAAATTATGTTGTAGAAAAAACACCTGAATATCTAATTGATATGCCACATGAAGGTCATGGTGTTCTTATTAACTCTC AATGGATTCTGACTGTAGCACATACTATTTTTTATGATTATGTTGGTAAGAGTTTAATGGTTGGTTCAAAAAATTATGAA ATAGAAAGCGTTCATATACACCCAGATTACTCCGAACCAGATAAAAGTTTACTCAAAGGTGATTTAGCGCCTTTGATGAG ATTTTTTAAATCTAGAAGTGATATTGCGTTAATCAAATTAACTTCACCTGTTAGCGGTATAGAACCAATTAATATATACA CGGGTAAAAGTGAAGAAGGCAAAAAGATCACTGTATACGGTAAGGGAGCTACAGGGAACGGAGTAACTGGTGAGTATCCT GATACTAAGTCACTTCGTGTTATGAGCCATTTTCAAAATGTTATTGAAAGCGCAGAAGGTAACTGGCTAGCATTTAAATT TGATGAACCAGCGAATGCACTATCACTTGAAGGAATGCATGGATCTGGAGACAGTGGTGGAGCATCAGTCATATTTGAAG ACAGTATTCCTTTTCTTGTAGGTTTATCAAGTTGGCAATTAGGTCATGGTGATATATCTACTTTTAAAGGCGGTTTGTAT GGAACTATTGCTTATCAAGTTAGGGTGTCAAGTTACTGTGACTGGATATTAGGTGTATTGGATAGCTAA
Upstream 100 bases:
>100_bases AATAAAGATAGTTAAGAACTCGCATTTTTGCTTATCTAGTGAGTTAAACGTGCATGTGCACTACTAAATTATAGCTATCA TCAACGGACATAGACGTAAC
Downstream 100 bases:
>100_bases CAAGAATCTAAAGTGAGGTTGCTAGCAGTTTGTTCTGTTTCGCTTCGCTGCACATTTCAGCAAACAATCAGCCCCTTAAA TGGGCGTCTATAAAAAAGAT
Product: peptidase S1 and S6 chymotrypsin/Hap
Products: NA
Alternate protein names: Exported Serine Endopeptidase; Trypsin Protease; Peptidase
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKILYLLFFCFFSIGSDAVVMRHDIPPENYVVEKTPEYLIDMPHEGHGVLINSQWILTVAHTIFYDYVGKSLMVGSKNYE IESVHIHPDYSEPDKSLLKGDLAPLMRFFKSRSDIALIKLTSPVSGIEPINIYTGKSEEGKKITVYGKGATGNGVTGEYP DTKSLRVMSHFQNVIESAEGNWLAFKFDEPANALSLEGMHGSGDSGGASVIFEDSIPFLVGLSSWQLGHGDISTFKGGLY GTIAYQVRVSSYCDWILGVLDS
Sequences:
>Translated_262_residues MKILYLLFFCFFSIGSDAVVMRHDIPPENYVVEKTPEYLIDMPHEGHGVLINSQWILTVAHTIFYDYVGKSLMVGSKNYE IESVHIHPDYSEPDKSLLKGDLAPLMRFFKSRSDIALIKLTSPVSGIEPINIYTGKSEEGKKITVYGKGATGNGVTGEYP DTKSLRVMSHFQNVIESAEGNWLAFKFDEPANALSLEGMHGSGDSGGASVIFEDSIPFLVGLSSWQLGHGDISTFKGGLY GTIAYQVRVSSYCDWILGVLDS >Mature_262_residues MKILYLLFFCFFSIGSDAVVMRHDIPPENYVVEKTPEYLIDMPHEGHGVLINSQWILTVAHTIFYDYVGKSLMVGSKNYE IESVHIHPDYSEPDKSLLKGDLAPLMRFFKSRSDIALIKLTSPVSGIEPINIYTGKSEEGKKITVYGKGATGNGVTGEYP DTKSLRVMSHFQNVIESAEGNWLAFKFDEPANALSLEGMHGSGDSGGASVIFEDSIPFLVGLSSWQLGHGDISTFKGGLY GTIAYQVRVSSYCDWILGVLDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28891; Mature: 28891
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILYLLFFCFFSIGSDAVVMRHDIPPENYVVEKTPEYLIDMPHEGHGVLINSQWILTVA CHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCHHEEECCCCCCEEEEECCCHHHHH HTIFYDYVGKSLMVGSKNYEIESVHIHPDYSEPDKSLLKGDLAPLMRFFKSRSDIALIKL HHHHHHHHCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE TSPVSGIEPINIYTGKSEEGKKITVYGKGATGNGVTGEYPDTKSLRVMSHFQNVIESAEG ECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC NWLAFKFDEPANALSLEGMHGSGDSGGASVIFEDSIPFLVGLSSWQLGHGDISTFKGGLY CEEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHCCCEE GTIAYQVRVSSYCDWILGVLDS EEEEEEEEHHHHHHHHHHHHCC >Mature Secondary Structure MKILYLLFFCFFSIGSDAVVMRHDIPPENYVVEKTPEYLIDMPHEGHGVLINSQWILTVA CHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCHHEEECCCCCCEEEEECCCHHHHH HTIFYDYVGKSLMVGSKNYEIESVHIHPDYSEPDKSLLKGDLAPLMRFFKSRSDIALIKL HHHHHHHHCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE TSPVSGIEPINIYTGKSEEGKKITVYGKGATGNGVTGEYPDTKSLRVMSHFQNVIESAEG ECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC NWLAFKFDEPANALSLEGMHGSGDSGGASVIFEDSIPFLVGLSSWQLGHGDISTFKGGLY CEEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHCCCEE GTIAYQVRVSSYCDWILGVLDS EEEEEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA