Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874943

Identifier: 160874943

GI number: 160874943

Start: 2193488

End: 2193721

Strand: Direct

Name: 160874943

Synonym: Sbal195_1828

Alternate gene names: NA

Gene position: 2193488-2193721 (Clockwise)

Preceding gene: 160874938

Following gene: 160874944

Centisome position: 41.02

GC content: 40.6

Gene sequence:

>234_bases
ATGATTTTTATTGATTTAACGCTATTTCGCTGTCCTGTACCTTTAGTTAAAGTAAAGCTTGCATTGAAGCCAATGCGAGA
CGGCGAGCAATTGCATATCTTACTCTCTGACTCAGGCTCGAGGCGAGATGTTCCCCAATATTTAAAAAAACAAGGTCATG
TCGTGCAAGAGTTGCGTAATGATGTGAGTCTGTTAGCCTTGATGATCACCAAAGTTGATCTATCTCAGGGATAA

Upstream 100 bases:

>100_bases
TTTCTAATTATCTCAACTAAAGGCAGAGATACTGCACTTAGCTTGTAGTTTGAGGTGCAACTTAGGATAATAGCCCAAGT
TCGTCTATAGCAAGTTCATT

Downstream 100 bases:

>100_bases
ATTGAGGATTTTCATGTTTAAATCCTGTCCGAGTCGCGGCCTAACCTCATGTGGGAGCCAGATGAGTGTACCTGATTAGT
GTGCCAGATGAGTGCAAGAG

Product: SirA family protein

Products: NA

Alternate protein names: SirA-Like Protein

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MIFIDLTLFRCPVPLVKVKLALKPMRDGEQLHILLSDSGSRRDVPQYLKKQGHVVQELRNDVSLLALMITKVDLSQG

Sequences:

>Translated_77_residues
MIFIDLTLFRCPVPLVKVKLALKPMRDGEQLHILLSDSGSRRDVPQYLKKQGHVVQELRNDVSLLALMITKVDLSQG
>Mature_77_residues
MIFIDLTLFRCPVPLVKVKLALKPMRDGEQLHILLSDSGSRRDVPQYLKKQGHVVQELRNDVSLLALMITKVDLSQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8727; Mature: 8727

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIDLTLFRCPVPLVKVKLALKPMRDGEQLHILLSDSGSRRDVPQYLKKQGHVVQELRN
CEEEEEEHHHCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHH
DVSLLALMITKVDLSQG
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIFIDLTLFRCPVPLVKVKLALKPMRDGEQLHILLSDSGSRRDVPQYLKKQGHVVQELRN
CEEEEEEHHHCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHH
DVSLLALMITKVDLSQG
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA