| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is tolQ [H]
Identifier: 160874897
GI number: 160874897
Start: 2136933
End: 2137619
Strand: Direct
Name: tolQ [H]
Synonym: Sbal195_1782
Alternate gene names: 160874897
Gene position: 2136933-2137619 (Clockwise)
Preceding gene: 160874896
Following gene: 160874898
Centisome position: 39.96
GC content: 41.92
Gene sequence:
>687_bases GTGCAAGCTGATATGTCGATTGTTGGGTTATTTTTACAAGCCAGTTTATTAGTGAAATTTGTTATGTTCACCTTACTTTG CTTGTCAGTGATGTCTTGGACGGTGATTTTACAACGCCGTAGCTTACTGACATCCGCAAAAAGTAAATCGGCGAAGTTTG AAGACAAATTTTGGTCAGGTGTTGATTTAAACCGTTTATATAAAGAATTATCGACTCGTCCTGATAATAGCGGTTTAGAG TCATTATTTGTGACTGGCTTTAAAGAATATTCACGCCTGAATAAATTAAATAGCAAAGTGCCCGATGCCGTGATGGACGG TACATCACGTGCTATGCGTGTGACACTTTCTCGCGAAATGGAAAAGTTAGAAGCGAATTTACCATTATTAGCGACCATTG GTTCGACTAGCCCTTATATCGGTTTATTTGGTACGGTATGGGGGATTATGAATTCATTTATCGCCATTGGTTCGATGGAA AACGCGACCTTAGCTATGGTTGCCCCCGGTATTGCTGAAGCCTTGATTGCAACGGCTATGGGTCTATTTGCTGCGATCCC TGCGGTTATTGCGTACAACCGTTTCTCGACTCAAGTCGATAAATTGGAAATGGCCTACGCAAACTTTATGGAAGAGTTCT CCAGCATTTTGCATCGCCAAGCATACAGTGAGAAGGAAGGGGCATAA
Upstream 100 bases:
>100_bases GGAGACTGTTATTGTGAAGGCACAGTGCTGGTTGTTTGTGTTGCGCTGTCACGAATGCGTCCCCGAGCTATTCCCTTAAA TATTGTGCAGGAGTTTGACA
Downstream 100 bases:
>100_bases TGCAACCAGCTTATCAGCGCAAACGTCGTCGCCCCGTTGCCGAAATCAACGTGGTGCCCTATATCGACGTGATGCTCGTG CTGTTAATTATTTTTATGGT
Product: protein TolQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDLNRLYKELSTRPDNSGLE SLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSME NATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQAYSEKEGA
Sequences:
>Translated_228_residues MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDLNRLYKELSTRPDNSGLE SLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSME NATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQAYSEKEGA >Mature_228_residues MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDLNRLYKELSTRPDNSGLE SLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSME NATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQAYSEKEGA
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=224, Percent_Identity=59.375, Blast_Score=285, Evalue=2e-78, Organism=Escherichia coli, GI1789381, Length=222, Percent_Identity=37.3873873873874, Blast_Score=124, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 25145; Mature: 25145
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC VDLNRLYKELSTRPDNSGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREM CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH EKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAM HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHH GLFAAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQAYSEKEGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC VDLNRLYKELSTRPDNSGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREM CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH EKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAM HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHH GLFAAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQAYSEKEGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]