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The map label for this gene is ybgC [H]

Identifier: 160874896

GI number: 160874896

Start: 2136542

End: 2136943

Strand: Direct

Name: ybgC [H]

Synonym: Sbal195_1781

Alternate gene names: 160874896

Gene position: 2136542-2136943 (Clockwise)

Preceding gene: 160874895

Following gene: 160874897

Centisome position: 39.96

GC content: 46.77

Gene sequence:

>402_bases
ATGATGTTTCATTGGCCTATTTCAGTCTATTACGAAGACACCGACGCTGGCGGCGTTGTCTATCATTCAAACTATCTCAA
CTTTTTTGAGCGGGCGAGAACCGAGTGGCTAAAAGCCCTTGGCGTGAGTCAGACTGCGCTGTTAGCCGACGATACCGCCT
TTGTGGTAAAGCGTGCGGAATTAGATTTTCGCAAAGCGGCACGTTTTGAACAGAACCTTATTGTTGAAACTAAGGTCATA
GAGTTGAAAAAGGCCTCGTTGATCTTTCATCAACGCTTGGTCGATAAACAGGGAGACTGTTATTGTGAAGGCACAGTGCT
GGTTGTTTGTGTTGCGCTGTCACGAATGCGTCCCCGAGCTATTCCCTTAAATATTGTGCAGGAGTTTGACAGTGCAAGCT
GA

Upstream 100 bases:

>100_bases
CGCGCTATTCCTATCTATATCTTCGTCGGGTCATTCACAAGTCTTGTTTCCCTAGGTATAGTAAGCGTCAATTTTTCAAC
CAAAATTTGCTTATTTTCAA

Downstream 100 bases:

>100_bases
TATGTCGATTGTTGGGTTATTTTTACAAGCCAGTTTATTAGTGAAATTTGTTATGTTCACCTTACTTTGCTTGTCAGTGA
TGTCTTGGACGGTGATTTTA

Product: tol-pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: Acyl-CoA thioesterase [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MMFHWPISVYYEDTDAGGVVYHSNYLNFFERARTEWLKALGVSQTALLADDTAFVVKRAELDFRKAARFEQNLIVETKVI
ELKKASLIFHQRLVDKQGDCYCEGTVLVVCVALSRMRPRAIPLNIVQEFDSAS

Sequences:

>Translated_133_residues
MMFHWPISVYYEDTDAGGVVYHSNYLNFFERARTEWLKALGVSQTALLADDTAFVVKRAELDFRKAARFEQNLIVETKVI
ELKKASLIFHQRLVDKQGDCYCEGTVLVVCVALSRMRPRAIPLNIVQEFDSAS
>Mature_133_residues
MMFHWPISVYYEDTDAGGVVYHSNYLNFFERARTEWLKALGVSQTALLADDTAFVVKRAELDFRKAARFEQNLIVETKVI
ELKKASLIFHQRLVDKQGDCYCEGTVLVVCVALSRMRPRAIPLNIVQEFDSAS

Specific function: Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=128, Percent_Identity=47.65625, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15236; Mature: 15236

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFHWPISVYYEDTDAGGVVYHSNYLNFFERARTEWLKALGVSQTALLADDTAFVVKRAE
CEEECEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEEEECCC
LDFRKAARFEQNLIVETKVIELKKASLIFHQRLVDKQGDCYCEGTVLVVCVALSRMRPRA
CCHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCC
IPLNIVQEFDSAS
CCHHHHHHCCCCC
>Mature Secondary Structure
MMFHWPISVYYEDTDAGGVVYHSNYLNFFERARTEWLKALGVSQTALLADDTAFVVKRAE
CEEECEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEEEECCC
LDFRKAARFEQNLIVETKVIELKKASLIFHQRLVDKQGDCYCEGTVLVVCVALSRMRPRA
CCHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCC
IPLNIVQEFDSAS
CCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]