| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874852
Identifier: 160874852
GI number: 160874852
Start: 2083558
End: 2084163
Strand: Direct
Name: 160874852
Synonym: Sbal195_1736
Alternate gene names: NA
Gene position: 2083558-2084163 (Clockwise)
Preceding gene: 160874850
Following gene: 160874853
Centisome position: 38.96
GC content: 41.58
Gene sequence:
>606_bases ATGAAAACAGTAATTCTAATTGGCGCTTTAGGTAAGATGGGACAAGCTGCTTTATCTGGTTTAGGTAACCATAAAGTTAT TACCGCAGGACGCTCTGGTGATGTAGATCATATCGTTGACATTACAGATGAAAACTCTATCAGAGCCTTATACGAGAAAG TAGGTCACTTTGACGCTGTAGTAAACACGGTTGGTTTTTGTGAATATGCCACTTTTGCCGATATGACAGAGTCACAATGG ATGGCAACGGTTATGAGCAAAATGATGGGACAAATAAGCCTTGTTCGTATTGGGCAAGATTATATCGCAGATAATGGTTC ATTCACTCTAATTAGCGGCATTTTAAATGTTAAACCAATCCCTTATGCAATTGCGGATGCAACAACAAGTGGTGCAATCG ATACCTTTGTTAAGTGTGTCGCACACGAAATGCCAAGAGGGACGCGAATCAACGTCGTAAATCCTACTGTACTTGAGGAA GCATGGGAGGTTTATGGTGAAATGATGCCTGGCTTCGAGCCAGTGCCAGGTAAACTAGTAGGTAAGGCGTTTGAAAGGTC AGTTGATGGTTTTATCAATGGTGAAGTCTTGTTCGTTGATGCTTAG
Upstream 100 bases:
>100_bases TTTTTATTGTATCACTTACAAAGAAACGTTGTTTCTAATTGTTTTTATCTCGCACTAACATAGCCCTTGCCGAAACAAAT CAGGCAAGACGGAGAGAGTC
Downstream 100 bases:
>100_bases CTGATACTTAACTTCTCGTTAAGAAGCACGCCTTTCAACGGCGTGTTTTTTACGTTAATAGAGTACTTACGTTAGCAAGC TTTGGTCGGATAAGCGGCAC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; Short-Chain Dehydrogenase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; NAD-Dependent Epimerase/Dehydratase; Oxidoreductase; Aklaviketone Reductase; Dehydrogenase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; DTDP-4-Dehydrorhamnose Reductase; Short Chain Dehydrogenase Family Protein; Dehydrogenases With Different Specificities; Oxidoreductase Short Chain Dehydrogenase/Reductase Family
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKTVILIGALGKMGQAALSGLGNHKVITAGRSGDVDHIVDITDENSIRALYEKVGHFDAVVNTVGFCEYATFADMTESQW MATVMSKMMGQISLVRIGQDYIADNGSFTLISGILNVKPIPYAIADATTSGAIDTFVKCVAHEMPRGTRINVVNPTVLEE AWEVYGEMMPGFEPVPGKLVGKAFERSVDGFINGEVLFVDA
Sequences:
>Translated_201_residues MKTVILIGALGKMGQAALSGLGNHKVITAGRSGDVDHIVDITDENSIRALYEKVGHFDAVVNTVGFCEYATFADMTESQW MATVMSKMMGQISLVRIGQDYIADNGSFTLISGILNVKPIPYAIADATTSGAIDTFVKCVAHEMPRGTRINVVNPTVLEE AWEVYGEMMPGFEPVPGKLVGKAFERSVDGFINGEVLFVDA >Mature_201_residues MKTVILIGALGKMGQAALSGLGNHKVITAGRSGDVDHIVDITDENSIRALYEKVGHFDAVVNTVGFCEYATFADMTESQW MATVMSKMMGQISLVRIGQDYIADNGSFTLISGILNVKPIPYAIADATTSGAIDTFVKCVAHEMPRGTRINVVNPTVLEE AWEVYGEMMPGFEPVPGKLVGKAFERSVDGFINGEVLFVDA
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21623; Mature: 21623
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVILIGALGKMGQAALSGLGNHKVITAGRSGDVDHIVDITDENSIRALYEKVGHFDAV CCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHH VNTVGFCEYATFADMTESQWMATVMSKMMGQISLVRIGQDYIADNGSFTLISGILNVKPI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCEEEEEHHHCCCCC PYAIADATTSGAIDTFVKCVAHEMPRGTRINVVNPTVLEEAWEVYGEMMPGFEPVPGKLV CEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHH GKAFERSVDGFINGEVLFVDA HHHHHHHCCCEECCEEEEEEC >Mature Secondary Structure MKTVILIGALGKMGQAALSGLGNHKVITAGRSGDVDHIVDITDENSIRALYEKVGHFDAV CCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHH VNTVGFCEYATFADMTESQWMATVMSKMMGQISLVRIGQDYIADNGSFTLISGILNVKPI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCEEEEEHHHCCCCC PYAIADATTSGAIDTFVKCVAHEMPRGTRINVVNPTVLEEAWEVYGEMMPGFEPVPGKLV CEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHH GKAFERSVDGFINGEVLFVDA HHHHHHHCCCEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA