| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874850
Identifier: 160874850
GI number: 160874850
Start: 2078863
End: 2079390
Strand: Direct
Name: 160874850
Synonym: Sbal195_1734
Alternate gene names: NA
Gene position: 2078863-2079390 (Clockwise)
Preceding gene: 160874849
Following gene: 160874852
Centisome position: 38.88
GC content: 40.53
Gene sequence:
>528_bases GTGGCACCTAAGATTGGAGATTGGGTAAGAAGCTATAGCGCTGGTATTTGGCAGATTTACCGAATTCTGGACTATAAATG CAAAGATCCCGTGACAGGCAAGGTAGTTGAAAAAACAACCATCTTCTCAAAAAGATTCGTTTCAGACTCCTTCAAACGTT CATTCAAAGAAGAATGCTGTGATCCAGCATTTGTGTATTTACTGGAGCTGGATAAAAAGAAGGAACTTGATGCGTTTATT GAAAGCAATTCTGGCTTGTATCAAAAGTTCATTGACCATGAACCGAAGCAAATTGATTGCATATACAATGCATGGATTGG TATACCACCGCACAGGGACAGCCAAATTATCGCAGACAAACTCAAAGACCTGGGCCCGATTAAAGATATCGAAATAAATC CAAAGCTGAATGAACTTGGATTTAATACAAAGGCTATGCCTTCATGGACAGTACAGTTTGTGTCGAGCGGCTTTGAATGT CTTGGTGGGTATTTGTCGTTCCAGTTTCTTCGAGTTCTGGAGCAATAA
Upstream 100 bases:
>100_bases ATAGGTACATAACAAGCGCCTTAAACATCGCGGCCTGCGGCCGCTGGACTCGCAACAAGTTGCTCGCCGTTTAGGCGTGC GTTAGGCATCAGGAGAGATC
Downstream 100 bases:
>100_bases ATGCCTAACAAATCAAACCTGCAAGTGTCCTTCGGGCAGGGACGCGCTAACGCGCGCCCCTGTTTGAGGCGTTATGTGTT TTGGTGAGCCATGGAAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAPKIGDWVRSYSAGIWQIYRILDYKCKDPVTGKVVEKTTIFSKRFVSDSFKRSFKEECCDPAFVYLLELDKKKELDAFI ESNSGLYQKFIDHEPKQIDCIYNAWIGIPPHRDSQIIADKLKDLGPIKDIEINPKLNELGFNTKAMPSWTVQFVSSGFEC LGGYLSFQFLRVLEQ
Sequences:
>Translated_175_residues MAPKIGDWVRSYSAGIWQIYRILDYKCKDPVTGKVVEKTTIFSKRFVSDSFKRSFKEECCDPAFVYLLELDKKKELDAFI ESNSGLYQKFIDHEPKQIDCIYNAWIGIPPHRDSQIIADKLKDLGPIKDIEINPKLNELGFNTKAMPSWTVQFVSSGFEC LGGYLSFQFLRVLEQ >Mature_174_residues APKIGDWVRSYSAGIWQIYRILDYKCKDPVTGKVVEKTTIFSKRFVSDSFKRSFKEECCDPAFVYLLELDKKKELDAFIE SNSGLYQKFIDHEPKQIDCIYNAWIGIPPHRDSQIIADKLKDLGPIKDIEINPKLNELGFNTKAMPSWTVQFVSSGFECL GGYLSFQFLRVLEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20218; Mature: 20087
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKIGDWVRSYSAGIWQIYRILDYKCKDPVTGKVVEKTTIFSKRFVSDSFKRSFKEECC CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DPAFVYLLELDKKKELDAFIESNSGLYQKFIDHEPKQIDCIYNAWIGIPPHRDSQIIADK CHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHCEECCCCCCCCHHHHHH LKDLGPIKDIEINPKLNELGFNTKAMPSWTVQFVSSGFECLGGYLSFQFLRVLEQ HHHCCCCCCEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure APKIGDWVRSYSAGIWQIYRILDYKCKDPVTGKVVEKTTIFSKRFVSDSFKRSFKEECC CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DPAFVYLLELDKKKELDAFIESNSGLYQKFIDHEPKQIDCIYNAWIGIPPHRDSQIIADK CHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHCEECCCCCCCCHHHHHH LKDLGPIKDIEINPKLNELGFNTKAMPSWTVQFVSSGFECLGGYLSFQFLRVLEQ HHHCCCCCCEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA