| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yuxL [H]
Identifier: 160874512
GI number: 160874512
Start: 1667495
End: 1670329
Strand: Direct
Name: yuxL [H]
Synonym: Sbal195_1394
Alternate gene names: 160874512
Gene position: 1667495-1670329 (Clockwise)
Preceding gene: 160874510
Following gene: 160874518
Centisome position: 31.18
GC content: 48.64
Gene sequence:
>2835_bases TTGAAGTTAATCCCTATCACATCTCTGGTGCTGTTATCCCTTGGAGTATTGCCAGCAGTGCAGGCTGAAACCAGCACTAA ACCGCTCACCCTCACAGACATCATGCACTTTGAATCCCTTGAAAAGCCGGTTATCGCAGATAAGGGCCAAGTCATCGCGG TCGAGTCTGCGCCCGATCGCGGGGATAGTCACGTCATTGTGAAAAATGTGCTATCGAAGCAAAGTTATCAAATCGCGGGT GGGTCAGATCCTTTAGTGAGTCACGATGGCCGCTTTGTGGCTGTGGTGGTCAAACCGAGTTTGCTCACGCGTGAAACGAG TGATGCCAAGGCGAAGAAAAAACTCAAATCTGACATGGTACTACTCGATACCCAAACGGGCACTCAAACCCGCTTTGAGC GCGTGAAGGAATTCGTGTTCAGTGATGACGGTAAGCATTTGGCAATGTGGTTTGAGGCCGATGAAGAGTCTAAAAAAGAC CCTGAGCCTAAAGCCATCGAAAAACTCGCTGAAGCAGGCACACAAACTCCTGCGAAAGCCGATAAGCCAAAGGTTGATAA GTTTGACCAAGGCCGTCGTTTTACTTTGCTTAGTTTAGACGATCAAACTAAGCGCATCGATGTTGAGCAAGTGACAGGTT ATGTGTTTGATAAGGCGAGCCGCCGACTTGCGTTAGCGGTGAATGATATCGTCAATAAACAGCATCAATTGCAATTAGTG GATTTACATACCCACCAAAAAACTGTCGTTTTTGATTCGCCTAGCCAACAGGTTGGTGCGTTAGCGCTGGCTAAAAATGG TCGTTGGCTGGCGTTTACGCAGGGCAAAGATAGCGAGTTACCCTATGGTCGCAGCTATCAGTTATCGCTGGTCGATTTGC CATCGGGTAAAATCAGCAAAACTCCTGAGTCACCTGAGTGGAAACTTAATCGCTACACAAGTTTAAGCTTCTCATTGGAT AGCGAACGGCTGTTCTTCGGCCGCGTGCCAGAGGTGAGCCAGCAGCTTAGTTTGCAGAAAATCACCGAAGAAAAAGACCT GTTCGATGCCGATATTGTTACCGGACAGCGCGGGCTTAAGGTGTGGCATGGTGACGACCCACGGATTAAACCCCACGAAA TCAAGCAATATGAGGATGAGCAAAAACGCACTTACCTTGCGGTATTGCATTTAGGATCGAATAACGTGGTGCAGCTTGGC GATAAAACCGTGCCAGATGTGACGATTTCACAGCATAAGCGCTTTATGTTGGCGAGTTCAGATTTGCCCTATCGCAAGAT GGCGACGTGGGCTGGCTTCTATCAAGACTATTATCTGGTCGACATTAACACTGGCAGTAAGGTACCTTTTTTGACTCAGC AGCCGAGCGATGCCGAGCCAAGTTTGTCGGGTAACGGCAAGTATGTGGCTTATTATCAGCAAGGTAATGTGTATCTTTAT GATATTGCTGAGGCCCATCGCACTAACCTGACAAGATCATTAAAGGTCAGCTTTGCCGATGAAGACCATGACTATCCATC GAGTGCGCCGGGATACGGTTTTGGCCCTTGGCTGAAAGATGACGCTGGGTTCTTGGTTTACGATAAATACGATGTCTGGC AGTTTAATACTGAATCTAAGGCGGGTTTTGCCTTAACCGCAGGTAAAGGGCGAACCCAGAAAATTCAATATCGTCTTGAG GGCTTAGTCGATAATCCCGATGAGCCGACTGAGCTTGCCTATAACGCCACTGTGTTACTCCACGGTTATAGCGATAAAAC CAAGGCCGATGGCTTCTACCAAGCGACGCTCGGCGCAGCGGGCGTGAAAACGCTGATGCAAGGCGAGTATAAGTTGACCG TGTTAGGACGCAGTAAAGACGCAGACACTATCGTGTTTTCTAAGGAGCGTTTCGACTTATTCCCCGACTTGTATACGGCT AACTACAGCGCACCGCAAAATGCGCTTAAGCAAACGGATTTAGATAAGCAACGCCAAGCGTTTAACTGGAGCAAAGCCGA GTTAGTTCACTGGACGAATGGCGACGGTAAGCCGTTAGATGGCGTGCTGATCAAGCCGACCAATTATCAAGCGGGTCAGC GTGTTCCTGTGTTGGTTTACTACTATCGCTTTATGACGGATAGACTGCACGCCTTCCCGCAGATGAACATTAACCACAGA CCTAATTTTGCTTGGTATATCAACAATGGCTATGCGGTGTTCCTGCCTGATATTCGCTTTGAAATTGGTTACCCAGGTGC GAGTTCGGTGCAAGCGCTCACCTCTGGCGTGCAAAAGCTGATTGAGATGGGCATTGCCGATCCCGATGCTATTGGTCTGC AAGGTCATTCTTGGAGTGGTTATCAAACGGCGTTTGCCATCACTCAAACTAAGATGTTTAAGGCGGCGGTCGCGGGTGCG CCGGTATCGAACATGACCAGCGCCTACAGTGGCATTCGCCATGGTACGGGTATTGCGCGTCAGTTCCAGTATGAAACGGG ACAGAGCCGTATTGGCGCGAGTTTGTTTGCCGCGCCGCAAAAGTACATTGAAAACTCGCCAGTATTTTACGCTGACCGAA TTCAAACGCCTTTGATGATCATGTTTGGTGATAAGGACGATGCGGTGCCTTGGGAACAAGGTGTTGAAATGTACTTGGCC ATGCGCCGTGCGGGTAAAGATGTAGTGTTCTTACAATATGAGGATGAGCCGCATCACTTGAAAAAGTACCCGAATAAGCT CGATTACAGCATTCGCATGATGCAGTATTTCGACCATTATCTGAAAGGTAAACCCGCGCCAGAATGGCTCAGCAAAGGCG AAGCCTATGTCGAGTACAAGGCCGATGATGAATAA
Upstream 100 bases:
>100_bases TGTGGTATAACTTGTAAAAATACTGGGTTCTCACCATGATGGAGAGCCAATGGTTAAAAAAGTCTACTTTAGTCTAACAA ATATATAAAAGAGGAAGACA
Downstream 100 bases:
>100_bases GTGACTGGTTTAGCTTATTGCTATCGCACTGAGTGACCTAGGTATTCTGTCACTAAGACGTTCAGTTGGTTAATTATGAA AACAAAAACGCCACCGATTA
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 944; Mature: 944
Protein sequence:
>944_residues MKLIPITSLVLLSLGVLPAVQAETSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDRGDSHVIVKNVLSKQSYQIAG GSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMVLLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKD PEPKAIEKLAEAGTQTPAKADKPKVDKFDQGRRFTLLSLDDQTKRIDVEQVTGYVFDKASRRLALAVNDIVNKQHQLQLV DLHTHQKTVVFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLPSGKISKTPESPEWKLNRYTSLSFSLD SERLFFGRVPEVSQQLSLQKITEEKDLFDADIVTGQRGLKVWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLG DKTVPDVTISQHKRFMLASSDLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESKAGFALTAGKGRTQKIQYRLE GLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAAGVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTA NYSAPQNALKQTDLDKQRQAFNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSGYQTAFAITQTKMFKAAVAGA PVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLA MRRAGKDVVFLQYEDEPHHLKKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE
Sequences:
>Translated_944_residues MKLIPITSLVLLSLGVLPAVQAETSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDRGDSHVIVKNVLSKQSYQIAG GSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMVLLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKD PEPKAIEKLAEAGTQTPAKADKPKVDKFDQGRRFTLLSLDDQTKRIDVEQVTGYVFDKASRRLALAVNDIVNKQHQLQLV DLHTHQKTVVFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLPSGKISKTPESPEWKLNRYTSLSFSLD SERLFFGRVPEVSQQLSLQKITEEKDLFDADIVTGQRGLKVWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLG DKTVPDVTISQHKRFMLASSDLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESKAGFALTAGKGRTQKIQYRLE GLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAAGVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTA NYSAPQNALKQTDLDKQRQAFNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSGYQTAFAITQTKMFKAAVAGA PVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLA MRRAGKDVVFLQYEDEPHHLKKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE >Mature_944_residues MKLIPITSLVLLSLGVLPAVQAETSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDRGDSHVIVKNVLSKQSYQIAG GSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMVLLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKD PEPKAIEKLAEAGTQTPAKADKPKVDKFDQGRRFTLLSLDDQTKRIDVEQVTGYVFDKASRRLALAVNDIVNKQHQLQLV DLHTHQKTVVFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLPSGKISKTPESPEWKLNRYTSLSFSLD SERLFFGRVPEVSQQLSLQKITEEKDLFDADIVTGQRGLKVWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLG DKTVPDVTISQHKRFMLASSDLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESKAGFALTAGKGRTQKIQYRLE GLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAAGVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTA NYSAPQNALKQTDLDKQRQAFNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSGYQTAFAITQTKMFKAAVAGA PVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLA MRRAGKDVVFLQYEDEPHHLKKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Caenorhabditis elegans, GI25144537, Length=221, Percent_Identity=25.7918552036199, Blast_Score=66, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 106146; Mature: 106146
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIPITSLVLLSLGVLPAVQAETSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDR CEECCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEECCCCC GDSHVIVKNVLSKQSYQIAGGSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMV CCCEEHHHHHHCCCCEEECCCCCCCEECCCCEEEEEECCCHHCCCCCHHHHHHHHHCCEE LLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKDPEPKAIEKLAEAGTQTPAKA EEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCC DKPKVDKFDQGRRFTLLSLDDQTKRIDVEQVTGYVFDKASRRLALAVNDIVNKQHQLQLV CCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHCCCEEEEEEHHHHCCCCEEEEE DLHTHQKTVVFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLPSGKISK EEECCCEEEEECCCCHHHCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCC TPESPEWKLNRYTSLSFSLDSERLFFGRVPEVSQQLSLQKITEEKDLFDADIVTGQRGLK CCCCCCEEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCE VWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLGDKTVPDVTISQHKRFMLASS EEECCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECC DLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY CCCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCEEEE DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESK ECCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCC AGFALTAGKGRTQKIQYRLEGLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAA CCEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEHHHHH GVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTANYSAPQNALKQTDLDKQRQA HHHHHHCCCEEEEEEECCCCCCEEEEECCHHCCCCCHHCCCCCCHHHHHHHCCCHHHHHH FNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR CCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCC PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSG CCEEEEEECCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YQTAFAITQTKMFKAAVAGAPVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQ CEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHCHHHHHCCH KYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGKDVVFLQYEDEPHHL HHHCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH KKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCC >Mature Secondary Structure MKLIPITSLVLLSLGVLPAVQAETSTKPLTLTDIMHFESLEKPVIADKGQVIAVESAPDR CEECCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEECCCCC GDSHVIVKNVLSKQSYQIAGGSDPLVSHDGRFVAVVVKPSLLTRETSDAKAKKKLKSDMV CCCEEHHHHHHCCCCEEECCCCCCCEECCCCEEEEEECCCHHCCCCCHHHHHHHHHCCEE LLDTQTGTQTRFERVKEFVFSDDGKHLAMWFEADEESKKDPEPKAIEKLAEAGTQTPAKA EEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCC DKPKVDKFDQGRRFTLLSLDDQTKRIDVEQVTGYVFDKASRRLALAVNDIVNKQHQLQLV CCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHCCCEEEEEEHHHHCCCCEEEEE DLHTHQKTVVFDSPSQQVGALALAKNGRWLAFTQGKDSELPYGRSYQLSLVDLPSGKISK EEECCCEEEEECCCCHHHCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCC TPESPEWKLNRYTSLSFSLDSERLFFGRVPEVSQQLSLQKITEEKDLFDADIVTGQRGLK CCCCCCEEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCE VWHGDDPRIKPHEIKQYEDEQKRTYLAVLHLGSNNVVQLGDKTVPDVTISQHKRFMLASS EEECCCCCCCHHHHHHHHHHHCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECC DLPYRKMATWAGFYQDYYLVDINTGSKVPFLTQQPSDAEPSLSGNGKYVAYYQQGNVYLY CCCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCEEEE DIAEAHRTNLTRSLKVSFADEDHDYPSSAPGYGFGPWLKDDAGFLVYDKYDVWQFNTESK ECCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCC AGFALTAGKGRTQKIQYRLEGLVDNPDEPTELAYNATVLLHGYSDKTKADGFYQATLGAA CCEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEHHHHH GVKTLMQGEYKLTVLGRSKDADTIVFSKERFDLFPDLYTANYSAPQNALKQTDLDKQRQA HHHHHHCCCEEEEEEECCCCCCEEEEECCHHCCCCCHHCCCCCCHHHHHHHCCCHHHHHH FNWSKAELVHWTNGDGKPLDGVLIKPTNYQAGQRVPVLVYYYRFMTDRLHAFPQMNINHR CCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCC PNFAWYINNGYAVFLPDIRFEIGYPGASSVQALTSGVQKLIEMGIADPDAIGLQGHSWSG CCEEEEEECCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YQTAFAITQTKMFKAAVAGAPVSNMTSAYSGIRHGTGIARQFQYETGQSRIGASLFAAPQ CEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHCHHHHHCCH KYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGKDVVFLQYEDEPHHL HHHCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH KKYPNKLDYSIRMMQYFDHYLKGKPAPEWLSKGEAYVEYKADDE HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]