| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is glgC [H]
Identifier: 160874479
GI number: 160874479
Start: 1623889
End: 1625151
Strand: Direct
Name: glgC [H]
Synonym: Sbal195_1360
Alternate gene names: 160874479
Gene position: 1623889-1625151 (Clockwise)
Preceding gene: 160874478
Following gene: 160874480
Centisome position: 30.37
GC content: 49.17
Gene sequence:
>1263_bases ATGTCTAATGTTCGTTATATCAGTAATTTAACTCGTGAAACCTATGCGTTGATTTTAGCTGGTGGGCGCGGGTCTCGCTT GCATGAACTCACGGATTGGCGTGCTAAACCGGCACTGTATTTCGGTGGTAAGTTTCGTATTATCGATTTTCCGCTGTCTA ACTGCATCAACTCGGGTATTCGCCGCGTGGGTGTGGTCACACAGTACAAGTCGCATTCCTTGATCCGCCATGTGATGCGC GGTTGGGGCCATTTTAAAAAGGAGCTCGGCGAGTCGGTGGAGATTTTACCCGCCTCACAACGCTATTCGGAAAACTGGTA TCAAGGCACGGCCGATGCGGTATTCCAAAACATCGACATCATTCGCCATGAGTTGCCTAAGTATGTGATGGTGCTGTCGG GCGATCACGTGTATCGCATGGATTATGCGGGGTTATTAGCCGCCCATGCCGAGTCGGGTGCAGACATGACAGTCTCATGC CTTGAGGTGCCTATCGCCGAAGCGGCGGGTTCGTTTGGGGTGATGGAAGTCGACGAAGAGATGCGCATTTTAGGCTTTGA AGAAAAGCCGCTGCAGCCTAAGCATTCTCCGGGTAATCCTGAAATGTGTTTAGCATCTATGGGCAACTATGTGTTTAACA CAGAGTTTTTGTTTGACCAACTCAAGAAAGATGCCTTAAACGAAAGCTCAGATCGGGATTTTGGTAAGGATATTATTCCT GCGATCATCGAAAAACATAATGTGTTCGCCTATCCATTTAAGAGCGCTTTCCCGAACGAGCAAGCCTATTGGCGCGATGT GGGGACGTTAGACTCTTTCTGGCAAGCGAATATGGAGCTGTTATCGCCCACGCCAGCACTGAATTTGTACGATGCCAAAT GGCCAATTTGGACCTTCCAAGAACAATTGCCACCGGCTAAATTTGTGTTTGATGACGACGACAGACGCGGCATGGCGCTG GACTCGATTGTCTCGGGCGGTTGTATTATTTCGGGTGCGACCGTGCGCCGTAGCGTATTGTTTAACGAAGTACGTGTCTG TTCTTATTCGTTGGTTGAAGATTCTGTGGTGCTACCCGATGTGGTCGTGCTGCGCCATTGCAAAATCAAGAATGCCATAC TCGACCGTGGCTGCATTATTCCCGAAGGCATGGTGATAGGTTATAACCATGATCACGACCGAGCCAAAGGTTTTAGGGTG TCGGAAAAAGGCGTCACCTTAGTGACCCGTGACATGCTAGGTTTACCTGTGGGTTATGAATAG
Upstream 100 bases:
>100_bases GGGAATGCAAGTGAGAAATACTCAGGGGAATACGGCAGTTTCTGCCGTATCGAGAAGCCATTTATGGGCAATCAGTTTGC CGATTTCGGAGTAAGAGCCT
Downstream 100 bases:
>100_bases CGGTTGCAATTCATCCTTTGAGTCGAGAAGCATAACGAGTACAAACGGCTTAGAAACGGGCTTATGCACAAGCTTTAACT ACGGGCATTAAGCTAAGTGC
Product: glucose-1-phosphate adenylyltransferase
Products: NA
Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSNVRYISNLTRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMR GWGHFKKELGESVEILPASQRYSENWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSC LEVPIAEAAGSFGVMEVDEEMRILGFEEKPLQPKHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIP AIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMAL DSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPDVVVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFRV SEKGVTLVTRDMLGLPVGYE
Sequences:
>Translated_420_residues MSNVRYISNLTRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMR GWGHFKKELGESVEILPASQRYSENWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSC LEVPIAEAAGSFGVMEVDEEMRILGFEEKPLQPKHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIP AIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMAL DSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPDVVVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFRV SEKGVTLVTRDMLGLPVGYE >Mature_419_residues SNVRYISNLTRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRG WGHFKKELGESVEILPASQRYSENWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCL EVPIAEAAGSFGVMEVDEEMRILGFEEKPLQPKHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPA IIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALD SIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPDVVVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFRVS EKGVTLVTRDMLGLPVGYE
Specific function: Glycogen biosynthesis; first step. [C]
COG id: COG0448
COG function: function code G; ADP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789837, Length=410, Percent_Identity=54.1463414634146, Blast_Score=464, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005836 - InterPro: IPR011831 - InterPro: IPR023049 - InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.27 [H]
Molecular weight: Translated: 47316; Mature: 47184
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVRYISNLTRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGI CCCCHHHHHHHHCEEEEEEECCCCCCCHHHHHCCCCCEEEECCEEEEEECCHHHHHHHHH RRVGVVTQYKSHSLIRHVMRGWGHFKKELGESVEILPASQRYSENWYQGTADAVFQNIDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHCCHHCCCCHHHHHHHHHH IRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEVDEE HHHHCCCEEEEECCCEEEEECHHHHHHHHCCCCCCEEEHHHHCCHHHHCCCCCEEEECCC MRILGFEEKPLQPKHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIP HHEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHH AIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQ HHHHCCCEEEEEHHHCCCCCCHHHHHCCCHHHHHHCCHHHCCCCCCCEEEECCCCEEEHH EQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPD HHCCCCEEEECCCCCCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCH VVVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFRVSEKGVTLVTRDMLGLPVGYE HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHCCCEECCCCCEEEEHHHHCCCCCCC >Mature Secondary Structure SNVRYISNLTRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGI CCCHHHHHHHHCEEEEEEECCCCCCCHHHHHCCCCCEEEECCEEEEEECCHHHHHHHHH RRVGVVTQYKSHSLIRHVMRGWGHFKKELGESVEILPASQRYSENWYQGTADAVFQNIDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHCCHHCCCCHHHHHHHHHH IRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEVDEE HHHHCCCEEEEECCCEEEEECHHHHHHHHCCCCCCEEEHHHHCCHHHHCCCCCEEEECCC MRILGFEEKPLQPKHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIP HHEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHH AIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQ HHHHCCCEEEEEHHHCCCCCCHHHHHCCCHHHHHHCCHHHCCCCCCCEEEECCCCEEEHH EQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPD HHCCCCEEEECCCCCCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCH VVVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFRVSEKGVTLVTRDMLGLPVGYE HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHCCCEECCCCCEEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA