| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is glgP [H]
Identifier: 160874478
GI number: 160874478
Start: 1621167
End: 1623698
Strand: Direct
Name: glgP [H]
Synonym: Sbal195_1359
Alternate gene names: 160874478
Gene position: 1621167-1623698 (Clockwise)
Preceding gene: 160874477
Following gene: 160874479
Centisome position: 30.32
GC content: 50.63
Gene sequence:
>2532_bases ATGACTGACGAAAGCGAACTGAGTCCAAATACCAGCGAAAAAACCGTATCATCTGCGCCAAAAGCGGCGAGTAAGAAGGC GCCAGCTAAGCGTCAGGCTAAACCTAAAGCCGTTGAACCCTGTGAGCCCTGCGATGCCTTGCCCGCTTCCTTTGAGCGCC ATTTACGTTATGGACTCAGCCGTGGCGAAGGTGTGAGCTGCGAATTATTTCAAGCGTTGGCCTATAGCGTCAAAGAACAG ATGCTAGACAATTGGCGTCAGACCCGTGTGGATGACAGCCATTTTCAGCGCAAGCAAGTGGCGTATTTATCCCTTGAGTT TTTGATGGGCAGGGCGCTGGGCAATGCACTGCTGAGTCTAGATTTACAGCAAGATAGCCGTGATGCCTTGAGCAACTATG CGGTATCGCTAGAAGAGTTAGAAGAAGCCGAACATGATGCCGGTTTAGGTAATGGCGGCTTAGGTCGATTGGCGGCGTGT TTCCTTGATAGCTGCGCCAGTATGGACTTATCCGTGACGGGTTATGGCATACGTTACGAATATGGCATGTTCGCCCAGAA GATAGTCGACGGTTATCAGGTTGAGCGTCCCGACCGTTGGCTGCGCGAAGGCAATCCGTGGGAAGTGCGCGTGCCGACCC ACAACGTGACAGTGCCGTTTTTTGGCCACACTGAATCCTATGTCGATAAACAGGGTCGCAGGCACATTATTTGGGTTGAA ACCCAAGATGTGCTCGCCGTCGCCTATGACATGCCAGTCCCTGGTTATCGCAATGGTCGGGTAAATACCCTGAGATTGTG GAAGGCCGAAGCGACCGATGACTTTGATTTAGCTGAGTTTAATCAAGGCGACTACACAGAAGCCGTGGCCCGTAAAAACT TGGCCGAGCAGATCACTATGGTGCTCTATCCCAATGATGCCAGCGAGAACGGCAAAGAGCTGCGATTACGTCAGCAATAC TTTTTATCCTCCGCCAGTTTGCAAGATTTGCTCAAACGTTGGGTGAGTCGCCATGGCCATGATTTCACCCAGTTTGCCGC TAAAAATGTGATGCAGCTGAACGACACTCACCCCAGCATTGCCGTGCCTGAGTTGATGCGGTTATTGATCGACGAATACG GTTTGGAATGGGACAGTGCGTGGGCGATCACCAGCCAAACCATGGCGTACACTAACCATACCCTATTGCCCGAAGCACTA GAGCGTTGGCCCGTGCGCATGATGGCGCAGATGCTGCCGCGTATTTTAGAAATCATTTATGAAATCAACGCCCGCTACTT AGATTTAGTCGCCCACCATTGGCCGGGGGACGCTAGCAAACTGGCGAGTATGTCGATTATTCAAGATGGCCCCCATCCCC ATGTGCGCATGGCGTATCTGGCGATTGTGGCGAGTTTTTCGGTCAACGGCGTCGCGGGTTTACACACTCAACTGCTTAAA TCTGGGTTGTTTAAGGATTTCTATGAGTTGTGGCCGCACAAGTTTAATAACCGCACCAATGGCGTGACGCCAAGGCGTTG GCTTGCCCATTGTAACCCTGCCTTAGCTAAGTTATTGACCGCCCATTTAGGTAAAGAATGGGTGACAGATTTAAGCCAGT TAACGGCGCTCAATGCCCTCACACAGGACACGGCATTTATCCAAAAATGGCGTGATGTGAAGCAAGCCAACAAGGCTTTG CTGGCGAAGATGATTGCTAAAGAATGTGGTGTCGAGTTCGATCCATCTATGCTGTTTGATGTGCAAGTGAAGCGTATTCA CGAATATAAACGTCAACTGCTCAATATCTTACATGTGGTCCATCTCTATCATCAGATCCAACAAGGCCACACAGAAAACA TGGTGCCACGTTGCGTGTTGATCGGCGGTAAAGCGGCGCCCGGTTACTTTATGGCTAAGTTGATCATCAAGCTCGCCAGC AATGTCGCCCACATGGTCAATTCCGATCCTTTAGTCACGCCTTACCTACGTTTTGCTTTCTTACCCAATTACAACGTCAG CGCCATGGAAAAAATTTGCCCGGGAACGGATTTATCCGAGCAAATTTCGACCGCGGGTAAAGAAGCATCGGGCACGGGCA ATATGAAGTTCATGATGAACGGCGCACTGACGATTGGCACTATGGATGGCGCCAATATCGAGATGTTAGAGGAAGTGGGT TCAGAGAACTTCTTCCTGTTTGGACTCAATGCAGAGCAGGTCGCTGAGGTACGCAACCACTATCATCCGCGCAGCATTAT TGACGATTCACCGGCGTTATCTGAGGTGATGAAGTTACTCAAGAGTGGTCATTTCAATCTGCTGGAGCCGGGGATTTTCG ATCCCATTATTGCCGCCATCGAAAGCAGCGACGATCAATGGATGACGGCCGCCGACTTTGACAGTTATCGAGTCGTGCAA GAAGCCGTGGCGCGGGCCTATAAAGATCCGCAGGTTTGGACGCAGATGAGTATTCGCAATACCGCCGCCAGCGGACGTTT TTCGAGTGATGTGACGATCGCGGGTTATCGCGATGAAATTTGGAAATTGTAA
Upstream 100 bases:
>100_bases CGCTGGATGCTCAGATCTCTACGACGCGATACTTGCTGCAAGATCGCAGTCTCATGCTTTTTCATGCTGATTTGATTTTC AAGAAATGAAGGAATTAACT
Downstream 100 bases:
>100_bases GGGCTGGGCTCTGGGTTATAAGTCTTGTTATAGCGGTTGAGTATAAGCGTTAAGTGTTTGAAAGGAATGCAACAATCAAT GGAAGGAATGGGGAATGCAA
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 843; Mature: 842
Protein sequence:
>843_residues MTDESELSPNTSEKTVSSAPKAASKKAPAKRQAKPKAVEPCEPCDALPASFERHLRYGLSRGEGVSCELFQALAYSVKEQ MLDNWRQTRVDDSHFQRKQVAYLSLEFLMGRALGNALLSLDLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAAC FLDSCASMDLSVTGYGIRYEYGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVE TQDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITMVLYPNDASENGKELRLRQQY FLSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSIAVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEAL ERWPVRMMAQMLPRILEIIYEINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLK SGLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNALTQDTAFIQKWRDVKQANKAL LAKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVVHLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLAS NVAHMVNSDPLVTPYLRFAFLPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVG SENFFLFGLNAEQVAEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAIESSDDQWMTAADFDSYRVVQ EAVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEIWKL
Sequences:
>Translated_843_residues MTDESELSPNTSEKTVSSAPKAASKKAPAKRQAKPKAVEPCEPCDALPASFERHLRYGLSRGEGVSCELFQALAYSVKEQ MLDNWRQTRVDDSHFQRKQVAYLSLEFLMGRALGNALLSLDLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAAC FLDSCASMDLSVTGYGIRYEYGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVE TQDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITMVLYPNDASENGKELRLRQQY FLSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSIAVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEAL ERWPVRMMAQMLPRILEIIYEINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLK SGLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNALTQDTAFIQKWRDVKQANKAL LAKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVVHLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLAS NVAHMVNSDPLVTPYLRFAFLPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVG SENFFLFGLNAEQVAEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAIESSDDQWMTAADFDSYRVVQ EAVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEIWKL >Mature_842_residues TDESELSPNTSEKTVSSAPKAASKKAPAKRQAKPKAVEPCEPCDALPASFERHLRYGLSRGEGVSCELFQALAYSVKEQM LDNWRQTRVDDSHFQRKQVAYLSLEFLMGRALGNALLSLDLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAACF LDSCASMDLSVTGYGIRYEYGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVET QDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITMVLYPNDASENGKELRLRQQYF LSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSIAVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEALE RWPVRMMAQMLPRILEIIYEINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLKS GLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNALTQDTAFIQKWRDVKQANKALL AKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVVHLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLASN VAHMVNSDPLVTPYLRFAFLPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVGS ENFFLFGLNAEQVAEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAIESSDDQWMTAADFDSYRVVQE AVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEIWKL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=822, Percent_Identity=50.6082725060827, Blast_Score=796, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=804, Percent_Identity=51.9900497512438, Blast_Score=792, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=824, Percent_Identity=49.3932038834951, Blast_Score=773, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=824, Percent_Identity=47.6941747572816, Blast_Score=734, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=664, Percent_Identity=52.5602409638554, Blast_Score=707, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=750, Percent_Identity=48.8, Blast_Score=719, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=810, Percent_Identity=46.1728395061728, Blast_Score=702, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=852, Percent_Identity=48.2394366197183, Blast_Score=789, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=827, Percent_Identity=48.7303506650544, Blast_Score=788, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=815, Percent_Identity=46.3803680981595, Blast_Score=684, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=826, Percent_Identity=48.7893462469734, Blast_Score=780, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=826, Percent_Identity=48.7893462469734, Blast_Score=780, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 94960; Mature: 94829
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDESELSPNTSEKTVSSAPKAASKKAPAKRQAKPKAVEPCEPCDALPASFERHLRYGLS CCCCCCCCCCCCHHHHHCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCC RGEGVSCELFQALAYSVKEQMLDNWRQTRVDDSHFQRKQVAYLSLEFLMGRALGNALLSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE DLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAACFLDSCASMDLSVTGYGIRYE ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECEEEEH YGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVE HHHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCEEEEECCCCHHHHHHCCCEEEEEEE TQDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITM CCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHEEE VLYPNDASENGKELRLRQQYFLSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSI EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC AVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEALERWPVRMMAQMLPRILEIIY CHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHH EINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLK HHCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH SGLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNAL HHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH TQDTAFIQKWRDVKQANKALLAKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLASNVAHMVNSDPLVTPYLRFAF HHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC LPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVG CCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHCC SENFFLFGLNAEQVAEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAI CCCEEEEECCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ESSDDQWMTAADFDSYRVVQEAVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEI CCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHH WKL HCC >Mature Secondary Structure TDESELSPNTSEKTVSSAPKAASKKAPAKRQAKPKAVEPCEPCDALPASFERHLRYGLS CCCCCCCCCCCHHHHHCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCC RGEGVSCELFQALAYSVKEQMLDNWRQTRVDDSHFQRKQVAYLSLEFLMGRALGNALLSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE DLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAACFLDSCASMDLSVTGYGIRYE ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECEEEEH YGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVE HHHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCEEEEECCCCHHHHHHCCCEEEEEEE TQDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITM CCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHEEE VLYPNDASENGKELRLRQQYFLSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSI EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC AVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEALERWPVRMMAQMLPRILEIIY CHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHH EINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLK HHCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH SGLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNAL HHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH TQDTAFIQKWRDVKQANKALLAKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLASNVAHMVNSDPLVTPYLRFAF HHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC LPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVG CCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHCC SENFFLFGLNAEQVAEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAI CCCEEEEECCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ESSDDQWMTAADFDSYRVVQEAVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEI CCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHH WKL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]