| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874440
Identifier: 160874440
GI number: 160874440
Start: 1570058
End: 1570567
Strand: Direct
Name: 160874440
Synonym: Sbal195_1321
Alternate gene names: NA
Gene position: 1570058-1570567 (Clockwise)
Preceding gene: 160874437
Following gene: 160874441
Centisome position: 29.36
GC content: 47.45
Gene sequence:
>510_bases ATGAAACACGTGAACTTAACGATGACAACAACCCAGATTCGCCGAGCAAATATGACCAAAAGGACGTTATCAGCGATTTG GGGCGCAGGCTTAGCTTGCTTGCTCTTGTCGGCAGGAAGCGTATCGGCAGGCACCATGTCCACAGGCAGCCAGACACATA CCCTGACTGTGGATATCGATAATATTCAAGTACAAACCGGCGCCTTAATGGTTGAGCTTTATGCCAATGCCGAGGATTAC GCCGCAGGCCACAATCCTAGCGCTTCTATGATAAAGCCCGTCACTAAGACAGAGCATAGGCTGGTATTTAGCGATCTAGC CGATGGTCAATATGCGGTCAAGGTCTTTCACGATGAAAACAACAATCACAAATTAGATACCAATATGTTAGGTGTGCCGA GTGAAGGCTATGGTTTTAGCAATAACGCCGGCAGTTTTGGACCTGCGAGCTTTAAAGACGCCAGCTTTAGTTTGCAGGCC GATGCGCAAATCACTATACATATTCGCTAA
Upstream 100 bases:
>100_bases AAATCTTGTTTCATGACTTTTGGCACCTGTTTTTAGTCCTGTGATTTTTTAAGCTAACTCCATCGCAGTTACTTATCAGC GCAAATAACAGGAGTAAGAC
Downstream 100 bases:
>100_bases GGGAGCGCTGCACCATGGATAGACGTCAATTTCTAGCAGGCTCAGCCGCCCTAATGACGACCGCAGTTTGGGCAAGTTCA GTTGATAAATTACTGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKHVNLTMTTTQIRRANMTKRTLSAIWGAGLACLLLSAGSVSAGTMSTGSQTHTLTVDIDNIQVQTGALMVELYANAEDY AAGHNPSASMIKPVTKTEHRLVFSDLADGQYAVKVFHDENNNHKLDTNMLGVPSEGYGFSNNAGSFGPASFKDASFSLQA DAQITIHIR
Sequences:
>Translated_169_residues MKHVNLTMTTTQIRRANMTKRTLSAIWGAGLACLLLSAGSVSAGTMSTGSQTHTLTVDIDNIQVQTGALMVELYANAEDY AAGHNPSASMIKPVTKTEHRLVFSDLADGQYAVKVFHDENNNHKLDTNMLGVPSEGYGFSNNAGSFGPASFKDASFSLQA DAQITIHIR >Mature_169_residues MKHVNLTMTTTQIRRANMTKRTLSAIWGAGLACLLLSAGSVSAGTMSTGSQTHTLTVDIDNIQVQTGALMVELYANAEDY AAGHNPSASMIKPVTKTEHRLVFSDLADGQYAVKVFHDENNNHKLDTNMLGVPSEGYGFSNNAGSFGPASFKDASFSLQA DAQITIHIR
Specific function: Unknown
COG id: COG4704
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18119; Mature: 18119
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHVNLTMTTTQIRRANMTKRTLSAIWGAGLACLLLSAGSVSAGTMSTGSQTHTLTVDID CCEEEEEEEHHHHHHCCCHHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCEEEEEEEEC NIQVQTGALMVELYANAEDYAAGHNPSASMIKPVTKTEHRLVFSDLADGQYAVKVFHDEN CEEEECCEEEEEEECCCCHHCCCCCCCHHHEECCCCCCCEEEEEECCCCEEEEEEEEECC NNHKLDTNMLGVPSEGYGFSNNAGSFGPASFKDASFSLQADAQITIHIR CCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEC >Mature Secondary Structure MKHVNLTMTTTQIRRANMTKRTLSAIWGAGLACLLLSAGSVSAGTMSTGSQTHTLTVDID CCEEEEEEEHHHHHHCCCHHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCEEEEEEEEC NIQVQTGALMVELYANAEDYAAGHNPSASMIKPVTKTEHRLVFSDLADGQYAVKVFHDEN CEEEECCEEEEEEECCCCHHCCCCCCCHHHEECCCCCCCEEEEEECCCCEEEEEEEEECC NNHKLDTNMLGVPSEGYGFSNNAGSFGPASFKDASFSLQADAQITIHIR CCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA