| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hcp [H]
Identifier: 160874412
GI number: 160874412
Start: 1530369
End: 1532033
Strand: Direct
Name: hcp [H]
Synonym: Sbal195_1293
Alternate gene names: 160874412
Gene position: 1530369-1532033 (Clockwise)
Preceding gene: 160874411
Following gene: 160874413
Centisome position: 28.62
GC content: 47.39
Gene sequence:
>1665_bases ATGTTCTGTATTCAGTGTGAGCAAACCATTCGTACACCCGCTGGCAATGGTTGTAGTTATTCCCAAGGTATGTGCGGCAA GTTGGCGGCAACGTCTGATCTGCAAGATTTGTTGATTTATATGCTGCAAGGCGTGTCTGTGTATGCGGTTAAAGCCCGCG AGCTGGGCATTATCGATGCTGAAATTGATAGTTTTGTGCCTAAAGCCTTTTTCGCGACCCTCACCAACGTAAATTTCGAT GACGAGCGCATTATGGCCTATACCCAGCAGGCGGCTCATTATCGTGCTCAGTTAAAAGCTTCTTACGAAGCGGCTTGTGA ACAAGCGGGTATTGCCGTTGAGCAAGTGCCGCAAGTCGCTCAGTTAGTGCTGGGGACCAGTAAGATTGAAATGCTCGCGC AGGCGCCGATTGCACTGCTGAATAAAGATAAGCATGACGTTCATGAAGACATCATGGGGCTAAGACTATTGTGTTTATAT GGCCTTAAGGGCGCGGCTGCTTACATGGAACATGCTCGCGTGTTGGGACAGACTGATGCCGATGTTGCAGGGCGCTTCCA TGAAATCATGTCTTTCTTAGGTGAGCCGAGTGTCGATGGCGATAAACTATTTACCACTGCGATGGATATTGGTCAGTTGA ACTACCGCATAATGGCCATGTTGGATGCGGGTGAAACTCAGGCCTTTGGTCATCCAGAGCCAACGGTGGTGAATACTAAG CCCTTTAAGGGCAAGGCAATTTTAGTCTCTGGTCATGATATGAAGGATTTAGAGCTTATCCTTGAGCAGACAGTCGGTAA GGGCATCAATGTGTTTACCCACGGCGAAATGTTGCCCGCTCTGGCGTATCCTGCCTTTAAAAAATACCCGCACCTTGTCG GTAATTACGGCAGTGCTTGGCAGAATCAACAGCAAGAATTTGCCAATTTCCCTGGCGCTGTGGTGATGACGTCCAATTGT ATTATCGACCCCAATGTTGGCAGTTATAGCGATCGTATCTTTACTCGTAGCATAGTGGGTTGGCCTGGTGTGGTGCATAT CGAAGGCGATGATTTCTCGGCTGTGATTGATAAAGCGTTGGCATTAGAGGGTTTTATCTACGATGAAATCCCCCACACTA TCACCATTGGTTTTGCCCATAATGCCTTGATGGCGGCAGCGCCAGCTGTGGTTGAAAACGTAAAAAGTGGTGCGATTAAG CATTTCTTCCTCGTCGGCGGCTGCGATGGTGACAAGGCCGACAGAAGCTACTTTACTGAACTTGCTAAATCCACACCTAA GGATTCAATAATCCTGACGCTAGGCTGCGGTAAGTACAAATTCAATAAGCTCGAATTTGGTGATATTAACGGTATCCCAC GCTTGCTCGATGTGGGCCAGTGTAACGATGCCTATTCTGCGATTCAGTTAGCGATTGCGTTAGCTGAAGTATTCGAATGT GATATCAATGAATTACCATTGAGTTTAGTGCTCTCTTGGTTCGAACAAAAAGCCATTGTGGTGTTACTGACACTGTTGTC ACTCGGTGTGAAAAACATTCGCACAGGCCCGACACCACCTGCATTTTTAACCGCCAATCTCGCCAAAATTTTGGAGGAGA AGTTTGGCTTACGCAATACCACCACAGTTGAGGCCGATTTAAAGACCATGTTGAACGTGGCGTAA
Upstream 100 bases:
>100_bases AGCATCTCATTCTAAAAATGACTGTCGCTTATGGTGTGTTTAGGTAGACTAGTTTTAAACATGCAAAAATAAAGCATGAA TTTAAATTAGGAGTCTATCC
Downstream 100 bases:
>100_bases ATCAGTCGGTGCTCATTGCTGAAGTCCGCTGAATATTGTGGCTTAAATCAGCAATGAGTGGTTGCTTAACTGCGGTTTTA ATTTCGATTTTGCCGAGGGT
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP [H]
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MFCIQCEQTIRTPAGNGCSYSQGMCGKLAATSDLQDLLIYMLQGVSVYAVKARELGIIDAEIDSFVPKAFFATLTNVNFD DERIMAYTQQAAHYRAQLKASYEAACEQAGIAVEQVPQVAQLVLGTSKIEMLAQAPIALLNKDKHDVHEDIMGLRLLCLY GLKGAAAYMEHARVLGQTDADVAGRFHEIMSFLGEPSVDGDKLFTTAMDIGQLNYRIMAMLDAGETQAFGHPEPTVVNTK PFKGKAILVSGHDMKDLELILEQTVGKGINVFTHGEMLPALAYPAFKKYPHLVGNYGSAWQNQQQEFANFPGAVVMTSNC IIDPNVGSYSDRIFTRSIVGWPGVVHIEGDDFSAVIDKALALEGFIYDEIPHTITIGFAHNALMAAAPAVVENVKSGAIK HFFLVGGCDGDKADRSYFTELAKSTPKDSIILTLGCGKYKFNKLEFGDINGIPRLLDVGQCNDAYSAIQLAIALAEVFEC DINELPLSLVLSWFEQKAIVVLLTLLSLGVKNIRTGPTPPAFLTANLAKILEEKFGLRNTTTVEADLKTMLNVA
Sequences:
>Translated_554_residues MFCIQCEQTIRTPAGNGCSYSQGMCGKLAATSDLQDLLIYMLQGVSVYAVKARELGIIDAEIDSFVPKAFFATLTNVNFD DERIMAYTQQAAHYRAQLKASYEAACEQAGIAVEQVPQVAQLVLGTSKIEMLAQAPIALLNKDKHDVHEDIMGLRLLCLY GLKGAAAYMEHARVLGQTDADVAGRFHEIMSFLGEPSVDGDKLFTTAMDIGQLNYRIMAMLDAGETQAFGHPEPTVVNTK PFKGKAILVSGHDMKDLELILEQTVGKGINVFTHGEMLPALAYPAFKKYPHLVGNYGSAWQNQQQEFANFPGAVVMTSNC IIDPNVGSYSDRIFTRSIVGWPGVVHIEGDDFSAVIDKALALEGFIYDEIPHTITIGFAHNALMAAAPAVVENVKSGAIK HFFLVGGCDGDKADRSYFTELAKSTPKDSIILTLGCGKYKFNKLEFGDINGIPRLLDVGQCNDAYSAIQLAIALAEVFEC DINELPLSLVLSWFEQKAIVVLLTLLSLGVKNIRTGPTPPAFLTANLAKILEEKFGLRNTTTVEADLKTMLNVA >Mature_554_residues MFCIQCEQTIRTPAGNGCSYSQGMCGKLAATSDLQDLLIYMLQGVSVYAVKARELGIIDAEIDSFVPKAFFATLTNVNFD DERIMAYTQQAAHYRAQLKASYEAACEQAGIAVEQVPQVAQLVLGTSKIEMLAQAPIALLNKDKHDVHEDIMGLRLLCLY GLKGAAAYMEHARVLGQTDADVAGRFHEIMSFLGEPSVDGDKLFTTAMDIGQLNYRIMAMLDAGETQAFGHPEPTVVNTK PFKGKAILVSGHDMKDLELILEQTVGKGINVFTHGEMLPALAYPAFKKYPHLVGNYGSAWQNQQQEFANFPGAVVMTSNC IIDPNVGSYSDRIFTRSIVGWPGVVHIEGDDFSAVIDKALALEGFIYDEIPHTITIGFAHNALMAAAPAVVENVKSGAIK HFFLVGGCDGDKADRSYFTELAKSTPKDSIILTLGCGKYKFNKLEFGDINGIPRLLDVGQCNDAYSAIQLAIALAEVFEC DINELPLSLVLSWFEQKAIVVLLTLLSLGVKNIRTGPTPPAFLTANLAKILEEKFGLRNTTTVEADLKTMLNVA
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O [H]
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family [H]
Homologues:
Organism=Escherichia coli, GI87081794, Length=552, Percent_Identity=61.9565217391304, Blast_Score=718, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 [H]
Pfam domain/function: PF03063 Prismane [H]
EC number: NA
Molecular weight: Translated: 60267; Mature: 60267
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCIQCEQTIRTPAGNGCSYSQGMCGKLAATSDLQDLLIYMLQGVSVYAVKARELGIIDA CEEEECCHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEEHHHCCEEEH EIDSFVPKAFFATLTNVNFDDERIMAYTQQAAHYRAQLKASYEAACEQAGIAVEQVPQVA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QLVLGTSKIEMLAQAPIALLNKDKHDVHEDIMGLRLLCLYGLKGAAAYMEHARVLGQTDA HHHHCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH DVAGRFHEIMSFLGEPSVDGDKLFTTAMDIGQLNYRIMAMLDAGETQAFGHPEPTVVNTK HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEECCC PFKGKAILVSGHDMKDLELILEQTVGKGINVFTHGEMLPALAYPAFKKYPHLVGNYGSAW CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCHHHCCCCCHH QNQQQEFANFPGAVVMTSNCIIDPNVGSYSDRIFTRSIVGWPGVVHIEGDDFSAVIDKAL HHHHHHHHCCCCEEEEECCEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH ALEGFIYDEIPHTITIGFAHNALMAAAPAVVENVKSGAIKHFFLVGGCDGDKADRSYFTE HHHCHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHH LAKSTPKDSIILTLGCGKYKFNKLEFGDINGIPRLLDVGQCNDAYSAIQLAIALAEVFEC HHHCCCCCCEEEEEECCCEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHC DINELPLSLVLSWFEQKAIVVLLTLLSLGVKNIRTGPTPPAFLTANLAKILEEKFGLRNT CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC TTVEADLKTMLNVA EEEHHHHHHHHCCC >Mature Secondary Structure MFCIQCEQTIRTPAGNGCSYSQGMCGKLAATSDLQDLLIYMLQGVSVYAVKARELGIIDA CEEEECCHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEEHHHCCEEEH EIDSFVPKAFFATLTNVNFDDERIMAYTQQAAHYRAQLKASYEAACEQAGIAVEQVPQVA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QLVLGTSKIEMLAQAPIALLNKDKHDVHEDIMGLRLLCLYGLKGAAAYMEHARVLGQTDA HHHHCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH DVAGRFHEIMSFLGEPSVDGDKLFTTAMDIGQLNYRIMAMLDAGETQAFGHPEPTVVNTK HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEECCC PFKGKAILVSGHDMKDLELILEQTVGKGINVFTHGEMLPALAYPAFKKYPHLVGNYGSAW CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCHHHCCCCCHH QNQQQEFANFPGAVVMTSNCIIDPNVGSYSDRIFTRSIVGWPGVVHIEGDDFSAVIDKAL HHHHHHHHCCCCEEEEECCEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH ALEGFIYDEIPHTITIGFAHNALMAAAPAVVENVKSGAIKHFFLVGGCDGDKADRSYFTE HHHCHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHH LAKSTPKDSIILTLGCGKYKFNKLEFGDINGIPRLLDVGQCNDAYSAIQLAIALAEVFEC HHHCCCCCCEEEEEECCCEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHC DINELPLSLVLSWFEQKAIVVLLTLLSLGVKNIRTGPTPPAFLTANLAKILEEKFGLRNT CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC TTVEADLKTMLNVA EEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA