| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is tyrA [H]
Identifier: 160874411
GI number: 160874411
Start: 1529001
End: 1530152
Strand: Direct
Name: tyrA [H]
Synonym: Sbal195_1292
Alternate gene names: 160874411
Gene position: 1529001-1530152 (Clockwise)
Preceding gene: 160874410
Following gene: 160874412
Centisome position: 28.59
GC content: 47.83
Gene sequence:
>1152_bases ATGGACTCAGGTATGAATGAAAAAACAACGGCCGAATTAGAACATCTTCGCGGCCTGATTGATGGTGTCGATCAGCAATT ATTGCATTTACTGCGTAAGCGCTTGGATCTCGTGGCGCAAGTGGGCACAGTGAAACACGGCGCCGGTTTACCGATTTATG CGCCGCAGCGTGAGGCTGCCATGCTCGCCAAACGCCGTGAAGAAGCGAAAAATATGGGGATTGCACCGCAATTAATTGAG GATATTTTACGACGCTTGATGCGCGAGTCTTACCTCAATGAAAAAGATGTTGGTTTTAAGCAAGTTAAAAAAGATCTCGG CTCAGTGGTGATTGTCGGCGGTAAAGGGCAACTCGGTGGACTGTTTTCACAAATGCTGACCTTATCTGGCTACCAAGTGA ATCTGCTCGATAAAGACGATTGGCAGCAAGCAGATAGCCTATTTGCCGATGCGGGCATGGTGTTAGTGACAGTGCCAATA GCGATTACTTGCGAGCTTATTCGCGAAAAGCTGAGCCAATTACCGGCAGACTGCATTCTGGCAGATTTGACCTCCATTAA GACTGAGCCGGTTAACGCTATGCTTGAGGCGCATTCTGGTCCGGTTGTAGGTTTTCATCCTATGTTTGGTCCCGATGTGG GCAGTCTGGCGAAGCAAGTCGTGGTGGTGTGCCACGGACGTGAGCCTGATAAATACCAATGGTTACTCGAGCAGATCGCA ATATGGGGCGCGCGGATTGTCGAAGCAGAGCCTGAACGTCACGACAGTGCGATGCAGTTAGTGCAGGCAATGCGTCACTT TTCGACCTTTGTGTATGGTTTGAATCTGTGCAAGGAAGAGGCAGATATTGATACTTTACTGCAATTTAGCTCGCCTATTT ACCGCTTAGAATTGGCTATGGTCGGGCGATTATTCGCCCAAAGCCCAGAGCTTTACGCCGATATTATTTTTGCTCAGCAA GATAGCCAACATGCAATCGGCGATTACTTAGATAACTACCGTGAAGCGTTGGAGCTGCTAAAACGCGGTGACAGGGACGA GTTTATTAAGCAGTTCCAAACCGTCGCTAAATGGTTTGGGGATTTTGCTCCCCAATTTCAGCGTGAAAGTCGTATTATGC TGCAATCGGTAAATGATATGAAAACCAATTAA
Upstream 100 bases:
>100_bases AGAAACTATTTTACGTGACGGCGCGGTGAAGTTATCTTCAATACTCCCGGCACGCTTCGATATGCTTAAAGTAGCTAACG CTTAAATTGGCTACAGCTTA
Downstream 100 bases:
>100_bases TAAATAACAAGTTACTTTTTAAAACGCCCATCATTGATGGGCGTTTTTTTATGAGATTTTGGCAGGTTTGATTGCTTATA TTAGCGATCACTTAAAGTGA
Product: bifunctional chorismate mutase/prephenate dehydrogenase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MDSGMNEKTTAELEHLRGLIDGVDQQLLHLLRKRLDLVAQVGTVKHGAGLPIYAPQREAAMLAKRREEAKNMGIAPQLIE DILRRLMRESYLNEKDVGFKQVKKDLGSVVIVGGKGQLGGLFSQMLTLSGYQVNLLDKDDWQQADSLFADAGMVLVTVPI AITCELIREKLSQLPADCILADLTSIKTEPVNAMLEAHSGPVVGFHPMFGPDVGSLAKQVVVVCHGREPDKYQWLLEQIA IWGARIVEAEPERHDSAMQLVQAMRHFSTFVYGLNLCKEEADIDTLLQFSSPIYRLELAMVGRLFAQSPELYADIIFAQQ DSQHAIGDYLDNYREALELLKRGDRDEFIKQFQTVAKWFGDFAPQFQRESRIMLQSVNDMKTN
Sequences:
>Translated_383_residues MDSGMNEKTTAELEHLRGLIDGVDQQLLHLLRKRLDLVAQVGTVKHGAGLPIYAPQREAAMLAKRREEAKNMGIAPQLIE DILRRLMRESYLNEKDVGFKQVKKDLGSVVIVGGKGQLGGLFSQMLTLSGYQVNLLDKDDWQQADSLFADAGMVLVTVPI AITCELIREKLSQLPADCILADLTSIKTEPVNAMLEAHSGPVVGFHPMFGPDVGSLAKQVVVVCHGREPDKYQWLLEQIA IWGARIVEAEPERHDSAMQLVQAMRHFSTFVYGLNLCKEEADIDTLLQFSSPIYRLELAMVGRLFAQSPELYADIIFAQQ DSQHAIGDYLDNYREALELLKRGDRDEFIKQFQTVAKWFGDFAPQFQRESRIMLQSVNDMKTN >Mature_383_residues MDSGMNEKTTAELEHLRGLIDGVDQQLLHLLRKRLDLVAQVGTVKHGAGLPIYAPQREAAMLAKRREEAKNMGIAPQLIE DILRRLMRESYLNEKDVGFKQVKKDLGSVVIVGGKGQLGGLFSQMLTLSGYQVNLLDKDDWQQADSLFADAGMVLVTVPI AITCELIREKLSQLPADCILADLTSIKTEPVNAMLEAHSGPVVGFHPMFGPDVGSLAKQVVVVCHGREPDKYQWLLEQIA IWGARIVEAEPERHDSAMQLVQAMRHFSTFVYGLNLCKEEADIDTLLQFSSPIYRLELAMVGRLFAQSPELYADIIFAQQ DSQHAIGDYLDNYREALELLKRGDRDEFIKQFQTVAKWFGDFAPQFQRESRIMLQSVNDMKTN
Specific function: Tyrosine biosynthesis [C]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
Organism=Escherichia coli, GI1788952, Length=372, Percent_Identity=58.0645161290323, Blast_Score=440, Evalue=1e-125,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR008244 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR011277 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01817 CM_2; PF02153 PDH [H]
EC number: =5.4.99.5; =1.3.1.12 [H]
Molecular weight: Translated: 43044; Mature: 43044
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSGMNEKTTAELEHLRGLIDGVDQQLLHLLRKRLDLVAQVGTVKHGAGLPIYAPQREAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH MLAKRREEAKNMGIAPQLIEDILRRLMRESYLNEKDVGFKQVKKDLGSVVIVGGKGQLGG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEECCCCCHHH LFSQMLTLSGYQVNLLDKDDWQQADSLFADAGMVLVTVPIAITCELIREKLSQLPADCIL HHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHCCHHHHH ADLTSIKTEPVNAMLEAHSGPVVGFHPMFGPDVGSLAKQVVVVCHGREPDKYQWLLEQIA HHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH IWGARIVEAEPERHDSAMQLVQAMRHFSTFVYGLNLCKEEADIDTLLQFSSPIYRLELAM HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VGRLFAQSPELYADIIFAQQDSQHAIGDYLDNYREALELLKRGDRDEFIKQFQTVAKWFG HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DFAPQFQRESRIMLQSVNDMKTN HHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDSGMNEKTTAELEHLRGLIDGVDQQLLHLLRKRLDLVAQVGTVKHGAGLPIYAPQREAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH MLAKRREEAKNMGIAPQLIEDILRRLMRESYLNEKDVGFKQVKKDLGSVVIVGGKGQLGG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEECCCCCHHH LFSQMLTLSGYQVNLLDKDDWQQADSLFADAGMVLVTVPIAITCELIREKLSQLPADCIL HHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHCCHHHHH ADLTSIKTEPVNAMLEAHSGPVVGFHPMFGPDVGSLAKQVVVVCHGREPDKYQWLLEQIA HHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH IWGARIVEAEPERHDSAMQLVQAMRHFSTFVYGLNLCKEEADIDTLLQFSSPIYRLELAM HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VGRLFAQSPELYADIIFAQQDSQHAIGDYLDNYREALELLKRGDRDEFIKQFQTVAKWFG HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DFAPQFQRESRIMLQSVNDMKTN HHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]